RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ERI2A8K979 691 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 SEC24DO94855 1032 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 SUN1O94901 812 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 FKBP9O95302 570 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 F7P08709 466 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 CHRM3P20309 590 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 STIP1P31948 543 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 CA7P43166 264 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 EFNA3P52797 238 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 SNRPNP63162 240 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 ACVR1Q04771 509 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 PCOLCEQ15113 449 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 C3AR1Q16581 482 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 PCID2Q5JVF3 399 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 CTSL3PQ5NE16 218 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 BNC2Q6ZN30 1099 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 NCCRP1Q6ZVX7 275 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 ZNF808Q8N4W9 903 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 AMER3Q8N944 861 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 OR9A1PQ8NGU1 263 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 MAGEC3Q8TD91 643 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 PLCD4Q9BRC7 762 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 KLHL1Q9NR64 748 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 RIC8BQ9NVN3 520 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 ANKRD10Q9NXR5 420 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 TAC3Q9UHF0 121 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 PCYOX1Q9UHG3 505 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 TINAGQ9UJW2 476 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 RIMKLBQ9ULI2 386 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 CRYL1Q9Y2S2 319 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 KLF2Q9Y5W3 355 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 EML6Q6ZMW3 1958 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 LRBAP50851 2863 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 OR5H15A6NDH6 313 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 C19orf84I3L1E1 186 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 KPNA5O15131 536 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 FOXS1O43638 330 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 LIASO43766 372 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 PRAMEF2O60811 474 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 VPS26AO75436 327 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 SYF2O95926 243 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 FDXRP22570 491 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 SLC26A3P40879 764 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 CCNFP41002 786 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 CASP6P55212 293 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 ADORA2A-AS1P86434 159 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 RBPJQ06330 500 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 DSG2Q14126 1118 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 CDSNQ15517 529 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 ZNF630Q2M218 657 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 KLHL38Q2WGJ6 581 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 BTBD16Q32M84 506 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 MINDY4Q4G0A6 757 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 ANKRD20A4Q4UJ75 823 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 ACSBG2Q5FVE4 666 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 ZNF766Q5HY98 468 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 SEL1L2Q5TEA6 688 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 LANCL3Q6ZV70 420 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 PAQR7Q86WK9 346 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 OR9A4Q8NGU2 314 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 DNAJB8Q8NHS0 232 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 METTL21AQ8WXB1 218 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 RERGQ96A58 199 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 PKP4Q99569 1192 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 MACROD1Q9BQ69 325 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 HES7Q9BYE0 225 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 ZNF700Q9H0M5 742 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 CHST11Q9NPF2 352 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 SPATA7Q9P0W8 599 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 ABI3Q9P2A4 366 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 MRFAP1Q9Y605 127 aa11.33□□□□□ -0.6
TRAFD1-205ENST00000548277 ABCA12Q86UK0 2595 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 F8P00451 2351 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 IGKV1-8A0A0C4DH67 115 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 ARHGEF33A8MVX0 844 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 GOLGA6L6A8MZA4 724 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 NPIPA5E9PKD4 350 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 HAT1O14929 419 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 P2RX6O15547 441 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 PRPF4O43172 522 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 SLC19A2O60779 497 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 VAPBO95292 243 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 C8orf89P0DMQ9 161 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 MYBL2P10244 700 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 ICAM2P13598 275 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 MGAT1P26572 445 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 RPL22P35268 128 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 BASP1P80723 227 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 OASLQ15646 514 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 INAQ16352 499 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 THEMIS2Q5TEJ8 643 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 RIPOR1Q6ZS17 1223 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 SLC13A5Q86YT5 568 aaPredicted RBP11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 ZC3H7AQ8IWR0 971 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 BEST3Q8N1M1 668 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 CCDC89Q8N998 374 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 HMGCLL1Q8TB92 370 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 SMPDL3AQ92484 453 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms