RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LRGUKQ96M69 825 aa12.97□□□□□ -0.33
PTCH1-215ENST00000547672 GPATCH1Q9BRR8 931 aaKnown RBP12.97□□□□□ -0.33
PTCH1-215ENST00000547672 RHBGQ9H310 441 aa12.97□□□□□ -0.33
PTCH1-215ENST00000547672 CLMPQ9H6B4 373 aa12.97□□□□□ -0.33
PTCH1-215ENST00000547672 FGF22Q9HCT0 170 aa12.97□□□□□ -0.33
PTCH1-215ENST00000547672 FZD3Q9NPG1 666 aa12.97□□□□□ -0.33
PTCH1-215ENST00000547672 SLC52A3Q9NQ40 469 aa12.97□□□□□ -0.33
PTCH1-215ENST00000547672 TM7SF3Q9NS93 570 aa12.97□□□□□ -0.33
PTCH1-215ENST00000547672 IMP3Q9NV31 184 aaKnown RBP12.97□□□□□ -0.33
PTCH1-215ENST00000547672 GEMIN8Q9NWZ8 242 aaKnown RBP12.97□□□□□ -0.33
PTCH1-215ENST00000547672 MAP10Q9P2G4 905 aa12.97□□□□□ -0.33
PTCH1-215ENST00000547672 BRWD1Q9NSI6 2320 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 PIPSLA2A3N6 862 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 C10orf142B7Z368 130 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 PDE5AO76074 875 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 FUCA1P04066 466 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 PGRP06401 933 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 HOXB6P17509 224 aaKnown RBP12.96□□□□□ -0.33
PTCH1-215ENST00000547672 RPS9P46781 194 aaKnown RBP12.96□□□□□ -0.33
PTCH1-215ENST00000547672 CLDN2P57739 230 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 PRDX1Q06830 199 aaKnown RBP12.96□□□□□ -0.33
PTCH1-215ENST00000547672 IER5LQ5T953 404 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 ANXA8L1Q5VT79 327 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 GALNT18Q6P9A2 607 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 IQCHQ86VS3 1027 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 RBM12BQ8IXT5 1001 aaKnown RBP12.96□□□□□ -0.33
PTCH1-215ENST00000547672 DEFB123Q8N688 67 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 OR4K1Q8NGD4 311 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 OR8J3Q8NGG0 315 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 SLC26A7Q8TE54 656 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 SLC13A3Q8WWT9 602 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 OR1E3Q8WZA6 343 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 CCDC124Q96CT7 223 aaKnown RBP12.96□□□□□ -0.33
PTCH1-215ENST00000547672 KLHDC7BQ96G42 594 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 OR52E6Q96RD3 313 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 HBEGFQ99075 208 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 MTERF1Q99551 399 aaKnown RBP12.96□□□□□ -0.33
PTCH1-215ENST00000547672 MYOCQ99972 504 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 GPR174Q9BXC1 333 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 S100A14Q9HCY8 104 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 TMEM184CQ9NVA4 438 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 ATAD3AQ9NVI7 634 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 ABCD2Q9UBJ2 740 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 CD300AQ9UGN4 299 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 SNX7Q9UNH6 387 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 CYP8B1Q9UNU6 501 aa12.96□□□□□ -0.33
PTCH1-215ENST00000547672 A0A1W2PPC4 97 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 STK25O00506 426 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 PRAMEF4O60810 478 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 SEMA3DO95025 777 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 CD22P20273 847 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 CD27P26842 260 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 CMPK1P30085 196 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 PKLRP30613 574 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 HPCAL1P37235 193 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 TRPC1P48995 793 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 ARFIP1P53367 373 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 DDX39BQ13838 428 aaKnown RBP12.95□□□□□ -0.34
PTCH1-215ENST00000547672 CEACAM7Q14002 265 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 RBBP5Q15291 538 aaKnown RBP12.95□□□□□ -0.34
PTCH1-215ENST00000547672 RCN1Q15293 331 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 TIGD2Q4W5G0 525 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 PRAMEF9Q5VWM5 478 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 SUSD1Q6UWL2 747 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 LAYNQ6UX15 382 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 GCNT7Q6ZNI0 430 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 RD3Q7Z3Z2 195 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 DHDDSQ86SQ9 333 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 GPR180Q86V85 440 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 DHFR2Q86XF0 187 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 PROSER1Q86XN7 944 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 TMEM126BQ8IUX1 230 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 TRIM48Q8IWZ4 208 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 PHACTR4Q8IZ21 702 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 SDR16C5Q8N3Y7 309 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 LCN9Q8WX39 176 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 MTERF3Q96E29 417 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 SPACA7Q96KW9 195 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 APOLD1Q96LR9 279 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 CHRDQ9H2X0 955 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 WDR37Q9Y2I8 494 aa12.95□□□□□ -0.34
PTCH1-215ENST00000547672 PCYT1BQ9Y5K3 369 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-215ENST00000547672 KIR2DS5A0A0G2JLQ3 304 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 A0A0G2JNG1 304 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 FAM221BA6H8Z2 402 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 MAGEB17A8MXT2 336 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 KIR2DS3K7RE56 304 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 IGHV4-34P06331 123 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 ANXA4P09525 319 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 CDH1P12830 882 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 F3P13726 295 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 CTSEP14091 401 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 IL9P15248 144 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 ACTR1BP42025 376 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 KIR3DL1P43629 444 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 SLC7A2P52569 658 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 ACTR1AP61163 376 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 KIR2DS5Q14953 304 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 CLCA4Q14CN2 919 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 FAM174BQ3ZCQ3 159 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms