RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 COPG1Q9Y678 874 aaKnown RBP12.7□□□□□ -0.38
CPSF6-204ENST00000547486 ANKRD12Q6UB98 2062 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 A0A0A6YYC8 382 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 H7BY64 318 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 I3L1I5 382 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 SMAPO00193 183 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 HAT1O14929 419 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 P2RX6O15547 441 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 ZBTB14O43829 449 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 VPS26AO75436 327 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 BANF1O75531 89 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 STATHP02808 62 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 IMPA1P29218 277 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 CARSP49589 748 aaKnown RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 EFNA3P52797 238 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 RELAQ04206 551 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 DSG2Q14126 1118 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 NAA25Q14CX7 972 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 SYT16Q17RD7 645 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 MSS51Q4VC12 460 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 C4orf17Q53FE4 359 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 UBE2R2Q712K3 238 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 IGDCC3Q8IVU1 814 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 LMNTD2Q8IXW0 634 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 PPIL6Q8IXY8 311 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 CATSPER1Q8NEC5 780 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 DNAJB14Q8TBM8 379 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 EEF1AKMT1Q8WVE0 214 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 PRAP1Q96NZ9 151 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 NAP1L3Q99457 506 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 NDNQ99608 321 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 WDR77Q9BQA1 342 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 YIPF2Q9BWQ6 316 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 SLC29A3Q9BZD2 475 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 CCDC68Q9H2F9 335 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 TRPC4Q9UBN4 977 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 PLEKHB1Q9UF11 243 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 PCYOX1Q9UHG3 505 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 NOVA2Q9UNW9 492 aaKnown RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 MRPS2Q9Y399 296 aaKnown RBP12.69□□□□□ -0.38
CPSF6-204ENST00000547486 NAV2Q8IVL1 2488 aa12.69□□□□□ -0.38
CPSF6-204ENST00000547486 ZNF839A8K0R7 811 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 HPP00738 406 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 COX6A1P12074 109 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 ENO3P13929 434 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-204ENST00000547486 ACPPP15309 386 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 EZRP15311 586 aaKnown RBP12.68□□□□□ -0.38
CPSF6-204ENST00000547486 FNTAP49354 379 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 EMP2P54851 167 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 ABATP80404 500 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 FAAH2Q6GMR7 532 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 LINC00696Q6ZRV3 163 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 ADCK2Q7Z695 626 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
CPSF6-204ENST00000547486 C2CD4AQ8NCU7 369 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-204ENST00000547486 CALML6Q8TD86 181 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 PPP4R1Q8TF05 950 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 PSMF1Q92530 271 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 RERGQ96A58 199 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-204ENST00000547486 MMABQ96EY8 250 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-204ENST00000547486 MACROD1Q9BQ69 325 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 PLAC1Q9HBJ0 212 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 ERRFI1Q9UJM3 462 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-204ENST00000547486 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 CDC14AQ9UNH5 594 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 SH2B3Q9UQQ2 575 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 COMMD10Q9Y6G5 202 aa12.68□□□□□ -0.38
CPSF6-204ENST00000547486 A1L4Q6 167 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 ANKUB1A6NFN9 424 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 WIPF3A6NGB9 483 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 IDSB3KWA1 339 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 MAP2K7O14733 419 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 NRDCO43847 1150 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 CCNDBP1O95273 360 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 AHSGP02765 367 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 CELA2AP08217 269 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 PGAM1P18669 254 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 IVDP26440 423 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 PGGT1BP53609 377 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 CDKN2DP55273 166 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 MAT1AQ00266 395 aaKnown RBP12.67□□□□□ -0.38
CPSF6-204ENST00000547486 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
CPSF6-204ENST00000547486 CRYMQ14894 314 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 ZXDCQ2QGD7 858 aaPredicted RBP12.67□□□□□ -0.38
CPSF6-204ENST00000547486 RBM20Q5T481 1227 aaKnown RBP12.67□□□□□ -0.38
CPSF6-204ENST00000547486 THEMIS2Q5TEJ8 643 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 GARNL3Q5VVW2 1013 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 PAQR3Q6TCH7 311 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 ISLR2Q6UXK2 745 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 MBOAT1Q6ZNC8 495 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 NDUFAF7Q7L592 441 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 VN1R4Q7Z5H5 301 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 KCNMB4Q86W47 210 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 KBTBD2Q8IY47 623 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 GRK7Q8WTQ7 553 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 MVB12AQ96EY5 273 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 PWWP2AQ96N64 755 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 LMF1Q96S06 567 aa12.67□□□□□ -0.38
CPSF6-204ENST00000547486 EBNA1BP2Q99848 306 aaKnown RBP12.67□□□□□ -0.38
CPSF6-204ENST00000547486 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms