RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 SHISA5Q8N114 240 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 AMER3Q8N944 861 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 CD200R1Q8TD46 325 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 ASB11Q8WXH4 323 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 MMABQ96EY8 250 aaPredicted RBP13.61□□□□□ -0.23
TROAP-203ENST00000546735 PBKQ96KB5 322 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 SIGLEC10Q96LC7 697 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 BARD1Q99728 777 aaKnown RBP13.61□□□□□ -0.23
TROAP-203ENST00000546735 CCDC68Q9H2F9 335 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 EPS8L2Q9H6S3 715 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 XAB2Q9HCS7 855 aaKnown RBP13.61□□□□□ -0.23
TROAP-203ENST00000546735 CDC14AQ9UNH5 594 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 DHRS7Q9Y394 339 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 MRPS2Q9Y399 296 aaKnown RBP13.61□□□□□ -0.23
TROAP-203ENST00000546735 ICE1Q9Y2F5 2266 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 NUP210LQ5VU65 1888 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 PCM1Q15154 2024 aa13.61□□□□□ -0.23
TROAP-203ENST00000546735 NSG1A0A0A6YYJ2 146 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 IDSB3KWA1 339 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 FOXS1O43638 330 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 CCNDBP1O95273 360 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 CLDN1O95832 211 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 DDAH2O95865 285 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 LDLRP01130 860 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 CELA2AP08217 269 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 IMPA1P29218 277 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 HSD17B2P37059 387 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 EFNA3P52797 238 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 CDC16Q13042 620 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 SPTAN1Q13813 2472 aaKnown RBP13.6□□□□□ -0.23
TROAP-203ENST00000546735 DSG2Q14126 1118 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 ZNF169Q14929 603 aaPredicted RBP13.6□□□□□ -0.23
TROAP-203ENST00000546735 CYP1B1Q16678 543 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 LONRF1Q17RB8 773 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 HSP90AA5PQ58FG0 334 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 THEMIS2Q5TEJ8 643 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 ISLR2Q6UXK2 745 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 NEK10Q6ZWH5 1172 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 UBE2R2Q712K3 238 aaPredicted RBP13.6□□□□□ -0.23
TROAP-203ENST00000546735 KCNMB4Q86W47 210 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 RP1L1Q8IWN7 2480 aaPredicted RBP13.6□□□□□ -0.23
TROAP-203ENST00000546735 ARHGEF39Q8N4T4 335 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 NAT8LQ8N9F0 302 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 FBXO15Q8NCQ5 510 aaPredicted RBP13.6□□□□□ -0.23
TROAP-203ENST00000546735 BRIX1Q8TDN6 353 aaKnown RBP13.6□□□□□ -0.23
TROAP-203ENST00000546735 GRHL3Q8TE85 626 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 COG1Q8WTW3 980 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 KCNJ9Q92806 393 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 RERGQ96A58 199 aaPredicted RBP13.6□□□□□ -0.23
TROAP-203ENST00000546735 VPS50Q96JG6 964 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 NDNQ99608 321 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 AGPAT4Q9NRZ5 378 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 IARS2Q9NSE4 1012 aaKnown RBP13.6□□□□□ -0.23
TROAP-203ENST00000546735 PLA2G3Q9NZ20 509 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 PTGFRNQ9P2B2 879 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 FBXO5Q9UKT4 447 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 SLC5A6Q9Y289 635 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 JRKLQ9Y4A0 524 aa13.6□□□□□ -0.23
TROAP-203ENST00000546735 WIPF3A6NGB9 483 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 ZNF839A8K0R7 811 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 H7BY64 318 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 GFYI3L273 518 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 E2F3O00716 465 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 ZBTB14O43829 449 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 PHF2O75151 1096 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 BANF1O75531 89 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 F10P00742 488 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 HEXBP07686 556 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 ANXA5P08758 320 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 EZRP15311 586 aaKnown RBP13.59□□□□□ -0.23
TROAP-203ENST00000546735 CXCR2P25025 360 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 SLC26A3P40879 764 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 MAGEA3P43357 314 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 TSFMP43897 325 aaKnown RBP13.59□□□□□ -0.23
TROAP-203ENST00000546735 EMP3P54852 163 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 ABATP80404 500 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 MFAP5Q13361 173 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 ARMC3Q5W041 872 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 ZNF787Q6DD87 383 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 NDUFAF7Q7L592 441 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 KBTBD2Q8IY47 623 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 SIRT6Q8N6T7 355 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 PSMF1Q92530 271 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 PRAP1Q96NZ9 151 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 MACROD1Q9BQ69 325 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 AARSD1Q9BTE6 412 aaKnown RBP13.59□□□□□ -0.23
TROAP-203ENST00000546735 KLHL42Q9P2K6 505 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 ADAMTS6Q9UKP5 1117 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 SH2B3Q9UQQ2 575 aa13.59□□□□□ -0.23
TROAP-203ENST00000546735 UTP20O75691 2785 aaKnown RBP13.59□□□□□ -0.23
TROAP-203ENST00000546735 PGRMC1O00264 195 aaKnown RBP13.58□□□□□ -0.24
TROAP-203ENST00000546735 PRPF4O43172 522 aaKnown RBP eCLIP13.58□□□□□ -0.24
TROAP-203ENST00000546735 JRKO75564 520 aa13.58□□□□□ -0.24
TROAP-203ENST00000546735 PRR35P0CG20 571 aa13.58□□□□□ -0.24
TROAP-203ENST00000546735 ENO3P13929 434 aaPredicted RBP13.58□□□□□ -0.24
TROAP-203ENST00000546735 SKIV2L2P42285 1042 aaKnown RBP13.58□□□□□ -0.24
TROAP-203ENST00000546735 TBPL1P62380 186 aa13.58□□□□□ -0.24
TROAP-203ENST00000546735 TIAL1Q01085 375 aaKnown RBP eCLIP13.58□□□□□ -0.24
TROAP-203ENST00000546735 TLR1Q15399 786 aa13.58□□□□□ -0.24
TROAP-203ENST00000546735 GARNL3Q5VVW2 1013 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms