RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 ABHD11Q8NFV4 315 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ZHX1-C8orf76Q96EF9 292 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 REXO5Q96IC2 774 aaKnown RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 HIST1H2AHQ96KK5 128 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 NECTIN4Q96NY8 510 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 HIST1H2AJQ99878 128 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 TMEM246Q9BRR3 403 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 H2AFJQ9BTM1 129 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 SUV39H2Q9H5I1 410 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 FAM118AQ9NWS6 357 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 NUDT4Q9NZJ9 180 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 PDP1Q9P0J1 537 aaPredicted RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 SLCO3A1Q9UIG8 710 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 PRKAB1Q9Y478 270 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 PRSS21Q9Y6M0 314 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 RFXANKO14593 260 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ACOX3O15254 700 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 KLK8O60259 260 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 SCO1O75880 301 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 EPN2O95208 641 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 EPB42P16452 691 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ITPKAP23677 461 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ACRV1P26436 265 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 CA5AP35218 305 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 CTNNB1P35222 781 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 RECQLP46063 649 aaPredicted RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 LRRC74AQ0VAA2 488 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 NPTX1Q15818 432 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ARHGAP15Q53QZ3 475 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 CEP78Q5JTW2 689 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.44□□□□□ -0.9
DDX11-229ENST00000545668 LRRC66Q68CR7 880 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 C22orf39Q6P5X5 142 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 GOLGA7Q7Z5G4 137 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 SPARTQ8N0X7 666 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 CADM3Q8N126 398 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 NATD1Q8N6N6 113 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ST13P5Q8NFI4 369 aaPredicted RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 ZNF420Q8TAQ5 688 aaPredicted RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 FAR1Q8WVX9 515 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 CCDC120Q96HB5 630 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 RBM4BQ9BQ04 359 aaKnown RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 RBM4Q9BWF3 364 aaKnown RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 FAM126AQ9BYI3 521 aaPredicted RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 ATG10Q9H0Y0 220 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 LRTM1Q9HBL6 345 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ERVK-18Q9QC07 812 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 DNAJB9Q9UBS3 223 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ERVK-11Q9UQG0 969 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 TNPO3Q9Y5L0 923 aaKnown RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 ARID1AO14497 2285 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 E2F3O00716 465 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 DLGAP1O14490 977 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 GAPDHSO14556 408 aaPredicted RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 WBP4O75554 376 aaKnown RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 PGRP06401 933 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 HRH2P25021 359 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 NCS1P62166 190 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ZNF846Q147U1 533 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 GPR33Q49SQ1 333 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 CCDC58Q4VC31 144 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 LYPLAL1Q5VWZ2 237 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 DOK6Q6PKX4 331 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 CRTC1Q6UUV9 634 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 DPY19L3Q6ZPD9 716 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 SZRD1Q7Z422 152 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 ZDHHC21Q8IVQ6 265 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 PCNPQ8WW12 178 aaKnown RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 SCRN2Q96FV2 425 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 PPP3R2Q96LZ3 170 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 PANX1Q96RD7 426 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 NUSAP1Q9BXS6 441 aaKnown RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 CCDC177Q9NQR7 707 aaPredicted RBP9.44□□□□□ -0.9
DDX11-229ENST00000545668 TDP1Q9NUW8 608 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 PRKAG2Q9UGJ0 569 aa9.44□□□□□ -0.9
DDX11-229ENST00000545668 EEDO75530 441 aaKnown RBP9.43□□□□□ -0.9
DDX11-229ENST00000545668 CCT3P49368 545 aaKnown RBP9.43□□□□□ -0.9
DDX11-229ENST00000545668 PWP1Q13610 501 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 TAB1Q15750 504 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 SMN1Q16637 294 aaKnown RBP9.43□□□□□ -0.9
DDX11-229ENST00000545668 PHKG1Q16816 387 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 PXDC1Q5TGL8 231 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 CES5AQ6NT32 575 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 GPR153Q6NV75 609 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 Q6ZSR9 355 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 TPRG1Q6ZUI0 275 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 Q6ZVU0 165 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 NXPE1Q8N323 547 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 ZBTB2Q8N680 514 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 LEMD2Q8NC56 503 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 GPR26Q8NDV2 337 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 LKAAEAR1Q8TD35 194 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 PDLIM5Q96HC4 596 aaKnown RBP9.43□□□□□ -0.9
DDX11-229ENST00000545668 C1QTNF3Q9BXJ4 246 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 SH3BP4Q9P0V3 963 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 ZNF225Q9UK10 706 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 SARDHQ9UL12 918 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 TPRKBQ9Y3C4 175 aa9.43□□□□□ -0.9
DDX11-229ENST00000545668 ZNF451Q9Y4E5 1061 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms