RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 C8orf89P0DMQ9 161 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 EEF1DP29692 281 aaKnown RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 IST1P53990 364 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 CSE1LP55060 971 aaKnown RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 EIF3EP60228 445 aaKnown RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 OR1C1Q15619 314 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 MEP1AQ16819 746 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 CCSMST1Q4G0I0 132 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 RNFT1Q5M7Z0 435 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 SPINK14Q6IE38 97 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 ZNF425Q6IV72 752 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 SLC25A25Q6KCM7 469 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 TTC23LQ6PF05 361 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 DARS2Q6PI48 645 aaKnown RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 LGI4Q8N135 537 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 KRT35Q92764 455 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 HDAC10Q969S8 669 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 MMABQ96EY8 250 aaPredicted RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 OLFM1Q99784 485 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 UTP23Q9BRU9 249 aaKnown RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 DPH7Q9BTV6 452 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 TSSK1BQ9BXA7 367 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 VN1R1Q9GZP7 353 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 GOLPH3Q9H4A6 298 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 NHEJ1Q9H9Q4 299 aaPredicted RBP13.91□□□□□ -0.18
RTN3-214ENST00000545432 COQ3Q9NZJ6 369 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 SPATA7Q9P0W8 599 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 KCNN3Q9UGI6 736 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 HRH3Q9Y5N1 445 aa13.91□□□□□ -0.18
RTN3-214ENST00000545432 AKAP6Q13023 2319 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 IQCF5A8MTL0 148 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 A8MUI8 341 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 FAM227AF5H4B4 570 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 PRRG2O14669 202 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 GOT2P00505 430 aaKnown RBP13.9□□□□□ -0.18
RTN3-214ENST00000545432 UQCRHP07919 91 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 HOXD4P09016 255 aaPredicted RBP13.9□□□□□ -0.18
RTN3-214ENST00000545432 ERVK-10P10266 1014 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 FOSL1P15407 271 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 CD46P15529 392 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 ABOP16442 354 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 MSX1P28360 303 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 CCNFP41002 786 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 SEMA3AQ14563 771 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 SYT16Q17RD7 645 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 HKDC1Q2TB90 917 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 LUZP1Q86V48 1076 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 CRLF3Q8IUI8 442 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 CCDC50Q8IVM0 306 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 MARVELD2Q8N4S9 558 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 CSNK1A1LQ8N752 337 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 ASB5Q8WWX0 329 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 PEX13Q92968 403 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 GBP4Q96PP9 640 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 TSPAN10Q9H1Z9 355 aaPredicted RBP13.9□□□□□ -0.18
RTN3-214ENST00000545432 MMP25Q9NPA2 562 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 RPH3AQ9Y2J0 694 aaPredicted RBP13.9□□□□□ -0.18
RTN3-214ENST00000545432 NFS1Q9Y697 457 aa13.9□□□□□ -0.18
RTN3-214ENST00000545432 A0A0A6YYC8 382 aaPredicted RBP13.89□□□□□ -0.19
RTN3-214ENST00000545432 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 H0YIG0 161 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 I3L1I5 382 aaPredicted RBP13.89□□□□□ -0.19
RTN3-214ENST00000545432 TXNDC9O14530 226 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 PSMD3O43242 534 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 MAN1A2O60476 641 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 VPS26AO75436 327 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 MATN4O95460 622 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 CMPK1P30085 196 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 SNRPNP63162 240 aaKnown RBP13.89□□□□□ -0.19
RTN3-214ENST00000545432 FASTKQ14296 549 aaKnown RBP13.89□□□□□ -0.19
RTN3-214ENST00000545432 GBX1Q14549 363 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 BTBD16Q32M84 506 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 FCRLBQ6BAA4 426 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 C11orf63Q6NUN7 778 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 AFTPHQ6ULP2 937 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 LANCL3Q6ZV70 420 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 GALNTL5Q7Z4T8 443 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.89□□□□□ -0.19
RTN3-214ENST00000545432 ZNF227Q86WZ6 799 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 RAB42Q8N4Z0 105 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 OR4L1Q8NH43 312 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 METTL21AQ8WXB1 218 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 ALS2CR12Q96Q35 445 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 OSBPL8Q9BZF1 889 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 DRC3Q9H069 523 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 P2RY12Q9H244 342 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 KLHL1Q9NR64 748 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 IFNKQ9P0W0 207 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 C19orf25Q9UFG5 118 aaPredicted RBP13.89□□□□□ -0.19
RTN3-214ENST00000545432 SLC2A6Q9UGQ3 507 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 PPT2Q9UMR5 302 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
RTN3-214ENST00000545432 PCDHA3Q9Y5H8 950 aa13.89□□□□□ -0.19
RTN3-214ENST00000545432 HCFC1P51610 2035 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 IGHV3-20A0A0C4DH32 117 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 A0A0U1RQJ8 604 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 PRMT5O14744 637 aaPredicted RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 ZNHIT1O43257 154 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 SEC24DO94855 1032 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms