RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 TMEM248Q9NWD8 314 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SEC14L3Q9UDX4 400 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TTC7AQ9ULT0 858 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 HS3ST2Q9Y278 367 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TBC1D30Q9Y2I9 924 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 HYOU1Q9Y4L1 999 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 FADS3Q9Y5Q0 445 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SNX10Q9Y5X0 201 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 DGKBQ9Y6T7 804 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PIKFYVEQ9Y2I7 2098 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 hCG_1818297A0A087WSY0 165 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 A0A088AWK7 358 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 A0A0U1RQJ8 604 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 IDSB3KWA1 339 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 I6L893 689 aaPredicted RBP6.49□□□□□ -1.37
LDHA-223ENST00000545215 K7ERQ8 282 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 RNF103O00237 685 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 APOL1O14791 398 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 NRP2O60462 931 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 SRGAP2O75044 1071 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 TOXO94900 526 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 FGF1P05230 155 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 NEFHP12036 1026 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 TYRP1P17643 537 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 ERCC2P18074 760 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 CD53P19397 219 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 IDSP22304 550 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 OR1E1P30953 314 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 CASQ1P31415 396 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 GJC1P36383 396 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 CDKN2BP42772 138 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 ATP1A4Q13733 1029 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 DPYSL3Q14195 570 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 ALFQ53S48 1182 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 ANKRD20A8PQ5CZ79 823 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 SLC9A4Q6AI14 798 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 C22orf39Q6P5X5 142 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 ENPP7Q6UWV6 458 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 C12orf54Q6X4T0 127 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 SPOCD1Q6ZMY3 1216 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 BBS12Q6ZW61 710 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 NLRP14Q86W24 1093 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 P3H2Q8IVL5 708 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 CCDC50Q8IVM0 306 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 TMEM151AQ8N4L1 468 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 MYRIPQ8NFW9 859 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 OR7D4Q8NG98 312 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 KIF18AQ8NI77 898 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 RAPGEF5Q92565 580 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 KRT35Q92764 455 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 RGMAQ96B86 450 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 HIST1H2AHQ96KK5 128 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 RNF157Q96PX1 679 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 PSMB7Q99436 277 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 HIST1H2AJQ99878 128 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.49□□□□□ -1.37
LDHA-223ENST00000545215 OSBPL8Q9BZF1 889 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 TMEM168Q9H0V1 697 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 MAGEH1Q9H213 219 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 GOLPH3Q9H4A6 298 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 SPATS2LQ9NUQ6 558 aaKnown RBP6.49□□□□□ -1.37
LDHA-223ENST00000545215 MPP6Q9NZW5 540 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 CWC15Q9P013 229 aaKnown RBP6.49□□□□□ -1.37
LDHA-223ENST00000545215 KLHL14Q9P2G3 628 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 SNX12Q9UMY4 172 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 ZNF835Q9Y2P0 537 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 SAR1BQ9Y6B6 198 aa6.49□□□□□ -1.37
LDHA-223ENST00000545215 INTS1Q8N201 2190 aaKnown RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 A0A0D9SEW6 157 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 GOLGA6L10A0A0M3HER8 536 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 CCDC78A2IDD5 438 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 NKX2-6A6NCS4 301 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 ARHGAP42A6NI28 874 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 C3orf70A6NLC5 250 aaPredicted RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 FAM72CH0Y354 149 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 APOC4-APOC2K7ER74 178 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 SLC16A6O15403 523 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 SMAD6O43541 496 aaKnown RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 FRS3O43559 492 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 RAMP2O60895 175 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 APOC2P02655 101 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 RNASE1P07998 156 aaKnown RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 FGF5P12034 268 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 TNNT1P13805 278 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 TCF4P15884 667 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PIK3CBP42338 1070 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PAFAH1B1P43034 410 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PRIM2P49643 509 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 DNA2P51530 1060 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 XRCC4Q13426 336 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 POLD3Q15054 466 aaPredicted RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 PAFAH1B3Q15102 231 aaKnown RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 PDK1Q15118 436 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PRKD1Q15139 912 aaPredicted RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 CA9Q16790 459 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 FAM174BQ3ZCQ3 159 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 RAB6CQ53S08 254 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PRR31Q5SQ13 230 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 FAM72AQ5TYM5 149 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms