RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 EMP3P54852 163 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 NFATC3Q12968 1075 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 NAB1Q13506 487 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 COL9A2Q14055 689 aaPredicted RBP15.02■□□□□ -0
CCDC78-216ENST00000544996 SSPNQ14714 243 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 FAM69BQ5VUD6 431 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 PRMT9Q6P2P2 845 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 LCTLQ6UWM7 567 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 SBSNQ6UWP8 590 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 ZNF605Q86T29 641 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 ADAMTSL2Q86TH1 951 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 APLFQ8IW19 511 aaPredicted RBP15.02■□□□□ -0
CCDC78-216ENST00000544996 CEP112Q8N8E3 955 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 NOA1Q8NC60 698 aaKnown RBP15.02■□□□□ -0
CCDC78-216ENST00000544996 OR2Y1Q8NGV0 311 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 C9orf43Q8TAL5 461 aaPredicted RBP15.02■□□□□ -0
CCDC78-216ENST00000544996 ADAMTS17Q8TE56 1095 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 FBF1Q8TES7 1133 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 FKBP10Q96AY3 582 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 PTERQ96BW5 349 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 FBXL8Q96CD0 374 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 IP6K3Q96PC2 410 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 OR2A5Q96R48 311 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 GPR22Q99680 433 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 CUEDC1Q9NWM3 386 aaPredicted RBP15.02■□□□□ -0
CCDC78-216ENST00000544996 CTNNAL1Q9UBT7 734 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 CDC14AQ9UNH5 594 aa15.02■□□□□ -0
CCDC78-216ENST00000544996 NPEPPSL1A6NEC2 478 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 ARGFXA6NJG6 315 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 B8ZZF3 427 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 CDC7O00311 574 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 ONECUT2O95948 504 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 ANXA5P08758 320 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 OTX2P32243 289 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 RRADP55042 308 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 RPS15AP62244 130 aaKnown RBP15.01□□□□□ -0.01
CCDC78-216ENST00000544996 PRTGQ2VWP7 1150 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 GARNL3Q5VVW2 1013 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 MRPL14Q6P1L8 145 aaKnown RBP15.01□□□□□ -0.01
CCDC78-216ENST00000544996 FRA10AC1Q70Z53 315 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 OVCH1Q7RTY7 1134 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 METTL27Q8N6F8 245 aaPredicted RBP15.01□□□□□ -0.01
CCDC78-216ENST00000544996 OR56A3Q8NH54 315 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 IFT81Q8WYA0 676 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 COL26A1Q96A83 441 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 PYCR2Q96C36 320 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 ABHD17AQ96GS6 310 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 EGFL8Q99944 293 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 WDR54Q9H977 334 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 CAB39LQ9H9S4 337 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 ZNF304Q9HCX3 659 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 ACSS2Q9NR19 701 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 DMGDHQ9UI17 866 aaKnown RBP15.01□□□□□ -0.01
CCDC78-216ENST00000544996 HEMK1Q9Y5R4 338 aaPredicted RBP15.01□□□□□ -0.01
CCDC78-216ENST00000544996 ATMQ13315 3056 aa15.01□□□□□ -0.01
CCDC78-216ENST00000544996 PEX12O00623 359 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 HAT1O14929 419 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 PHGDHO43175 533 aaKnown RBP15□□□□□ -0.01
CCDC78-216ENST00000544996 C1QAP02745 245 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 NPPBP16860 134 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 ITGAXP20702 1163 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 OR1D4P47884 311 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 HNMTP50135 292 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 RAB10P61026 200 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 CDKL1Q00532 357 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 NDUFA9Q16795 377 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 PPP1R3AQ16821 1122 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 PLD3Q8IV08 490 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 TMEM102Q8N9M5 508 aaPredicted RBP15□□□□□ -0.01
CCDC78-216ENST00000544996 ANKRD49Q8WVL7 239 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 THAP11Q96EK4 314 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 MVB12AQ96EY5 273 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 DERL2Q9GZP9 239 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 ING2Q9H160 280 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 SLC22A11Q9NSA0 550 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 TLK1Q9UKI8 766 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 NXT1Q9UKK6 140 aaKnown RBP15□□□□□ -0.01
CCDC78-216ENST00000544996 IKZF3Q9UKT9 509 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 RUVBL1Q9Y265 456 aaKnown RBP15□□□□□ -0.01
CCDC78-216ENST00000544996 OARD1Q9Y530 152 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 MAU2Q9Y6X3 613 aa15□□□□□ -0.01
CCDC78-216ENST00000544996 KCNE1BA0A087WTH5 132 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 PRPF4O43172 522 aaKnown RBP eCLIP14.99□□□□□ -0.01
CCDC78-216ENST00000544996 IGHEP01854 428 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 CCDC166P0CW27 439 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 CDH1P12830 882 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 CCR8P51685 355 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 ATP6V0D1P61421 351 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 CSNK1G2P78368 415 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 OCA2Q04671 838 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 TSNQ15631 228 aaKnown RBP14.99□□□□□ -0.01
CCDC78-216ENST00000544996 HKDC1Q2TB90 917 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 RAPH1Q70E73 1250 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 MED25Q71SY5 747 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 RELL1Q8IUW5 271 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 TBC1D19Q8N5T2 526 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.99□□□□□ -0.01
CCDC78-216ENST00000544996 NACC2Q96BF6 587 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 C10orf90Q96M02 699 aa14.99□□□□□ -0.01
CCDC78-216ENST00000544996 CYTH2Q99418 400 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms