RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 THEGLP0DJG4 465 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 GGT1P19440 569 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CD72P21854 359 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CES1P23141 567 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CYP2F1P24903 491 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 IRS1P35568 1242 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CTSKP43235 329 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 GSK3AP49840 483 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 AIF1P55008 147 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CHRNB3Q05901 458 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 IFRD2Q12894 506 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 PLD1Q13393 1074 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 EIF4EBP2Q13542 120 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 PAFAH1B3Q15102 231 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 SMAD1Q15797 465 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 PROX2Q3B8N5 592 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TBRG1Q3YBR2 411 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ARMCX4Q5H9R4 360 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TECRLQ5HYJ1 363 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TOR2AQ5JU69 321 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SHEQ5VZ18 495 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ANGPTL8Q6UXH0 198 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SLC46A3Q7Z3Q1 461 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 KDELC2Q7Z4H8 507 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 KCNMB4Q86W47 210 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 RNF130Q86XS8 419 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 VWA5B2Q8N398 1253 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 OR8K5Q8NH50 307 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SENP8Q96LD8 212 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CDADC1Q9BWV3 514 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 DGCR6LQ9BY27 220 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 AMBRA1Q9C0C7 1298 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 NARFLQ9H6Q4 476 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SFXN1Q9H9B4 322 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ATP13A1Q9HD20 1204 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ZNF358Q9NW07 568 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CCDC167Q9P0B6 97 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 KLK14Q9P0G3 267 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 DPP7Q9UHL4 492 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ELF5Q9UKW6 265 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 A0A0X1KG70 313 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ATP6AP2A0A1C7CYW4 349 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 A6NL46 340 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 H3BQ06 376 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 INPP4BO15327 924 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CD3EAPO15446 510 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 XYLBO75191 536 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 FGF19O95750 216 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CALCAP01258 141 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 HLA-DQB1P01920 261 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 RETP07949 1114 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CNPP09543 421 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 HRH2P25021 359 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SDC4P31431 198 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ALDH9A1P49189 494 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 IRF9Q00978 393 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 LIPEQ05469 1076 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SCARB2Q14108 478 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 EIF4HQ15056 248 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 ACAP2Q15057 778 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TSC22D1Q15714 1073 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TBPL2Q6SJ96 375 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 PAQR9Q6ZVX9 377 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TSPYL5Q86VY4 417 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 ADGRG3Q86Y34 549 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 KRT73Q86Y46 540 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 RASGRP3Q8IV61 690 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 EID3Q8N140 333 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ZMIZ2Q8NF64 920 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ZNF461Q8TAF7 563 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TFAP2BQ92481 460 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 GTF2H4Q92759 462 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 NXPE3Q969Y0 559 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 C19orf60Q96EN9 201 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TSPAN17Q96FV3 270 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 HPDLQ96IR7 371 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 HYLS1Q96M11 299 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 OPALINQ96PE5 141 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SDHCQ99643 169 aaPredicted RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 SMOC1Q9H4F8 434 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 GOLGA2P5Q9HBQ8 144 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TRIM39Q9HCM9 518 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 DYRK4Q9NR20 520 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 POLE4Q9NR33 117 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CHRAC1Q9NRG0 131 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 MRPL17Q9NRX2 175 aaKnown RBP5.11□□□□□ -1.59
USP28-213ENST00000544967 SMPD4Q9NXE4 827 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 XPR1Q9UBH6 696 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 TBC1D24Q9ULP9 559 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 AP4E1Q9UPM8 1137 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 GINS2Q9Y248 185 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 FKBP7Q9Y680 259 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 STON1Q9Y6Q2 735 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CDH23Q9H251 3354 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 FAM149AA5PLN7 773 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 HIDE1A8MVS5 230 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 ANHXE9PGG2 379 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 CACNG3O60359 315 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 SEC22BO75396 215 aa5.11□□□□□ -1.59
USP28-213ENST00000544967 VPS26AO75436 327 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms