RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 LRIF1Q5T3J3 769 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 LAMTOR1Q6IAA8 161 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 METTL2BQ6P1Q9 378 aaKnown RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 TMEM65Q6PI78 240 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 PAMR1Q6UXH9 720 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 RBFAQ8N0V3 343 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 C9orf62Q8N4C0 152 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 REPS2Q8NFH8 660 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 GPR152Q8TDT2 470 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
TCF4-209ENST00000544241 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 ZSWIM3Q96MP5 696 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 BARD1Q99728 777 aaKnown RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 TRIM62Q9BVG3 475 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 CLMPQ9H6B4 373 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 ZNF304Q9HCX3 659 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 ZNF225Q9UK10 706 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 SSR3Q9UNL2 185 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 POFUT2Q9Y2G5 429 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 TRBV5-3A0A0A0MS03 114 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 A0A0B4J293 547 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 BTN3A1O00481 513 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 E2F3O00716 465 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 SCO1O75880 301 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 WDPCPO95876 746 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 IL1AP01583 271 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 ANXA8P13928 327 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 GLULP15104 373 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 POU3F3P20264 500 aaPredicted RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 DDCP20711 480 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 PTBP1P26599 531 aaKnown RBP eCLIP10.04□□□□□ -0.86e-7■■■■■ 31.5
TCF4-209ENST00000544241 IDH2P48735 452 aaKnown RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 INPP1P49441 399 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 RHAGQ02094 409 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 ABRQ12979 859 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 WSCD2Q2TBF2 565 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 FAM171A1Q5VUB5 890 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 OR4F3Q6IEY1 312 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 KDELC1Q6UW63 502 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 DDX53Q86TM3 631 aaKnown RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 LDB1Q86U70 411 aaPredicted RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 COMMD7Q86VX2 200 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 GPSM1Q86YR5 675 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 SLC44A2Q8IWA5 706 aaPredicted RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 GHDCQ8N2G8 530 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 OR4M2Q8NGB6 313 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 TESCQ96BS2 214 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 RNF31Q96EP0 1072 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 TOE1Q96GM8 510 aaKnown RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 CPPED1Q9BRF8 314 aaPredicted RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 MARVELD1Q9BSK0 173 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 TAPBPLQ9BX59 468 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 PDGFDQ9GZP0 370 aaPredicted RBP10.04□□□□□ -0.8
TCF4-209ENST00000544241 TMEM168Q9H0V1 697 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 TNKS2Q9H2K2 1166 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 NT5DC2Q9H857 520 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 CATSPERZQ9NTU4 200 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 MCUBQ9NWR8 336 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 ASIC5Q9NY37 505 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 CD274Q9NZQ7 290 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 FNIP2Q9P278 1114 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 PCDHGB7Q9Y5F8 929 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 FKBP7Q9Y680 259 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 SESN1Q9Y6P5 492 aa10.04□□□□□ -0.8
TCF4-209ENST00000544241 SHROOM3Q8TF72 1996 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 TUBAL3A6NHL2 446 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 ARVCFO00192 962 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 SOCS7O14512 581 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 ADAMDEC1O15204 470 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 NDUFA2O43678 99 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 ESR1P03372 595 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 SLC2A2P11168 524 aaPredicted RBP10.03□□□□□ -0.8
TCF4-209ENST00000544241 HMGB2P26583 209 aaKnown RBP10.03□□□□□ -0.8
TCF4-209ENST00000544241 CCR1P32246 355 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 HMGCLP35914 325 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 CBX5P45973 191 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 CCT3P49368 545 aaKnown RBP10.03□□□□□ -0.8
TCF4-209ENST00000544241 GZMMP51124 257 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 STC1P52823 247 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 CLDN20P56880 219 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 DAOAP59103 153 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 CDC42P60953 191 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 RPL38P63173 70 aaKnown RBP10.03□□□□□ -0.8
TCF4-209ENST00000544241 ACVR1Q04771 509 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 SNTA1Q13424 505 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 RFTN2Q52LD8 501 aaPredicted RBP10.03□□□□□ -0.8
TCF4-209ENST00000544241 SPANXN4Q5MJ08 99 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 C9orf57Q5W0N0 161 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 ANKRD54Q6NXT1 300 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 METAP1DQ6UB28 335 aaPredicted RBP10.03□□□□□ -0.8
TCF4-209ENST00000544241 RNF165Q6ZSG1 346 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 EIF3MQ7L2H7 374 aaKnown RBP10.03□□□□□ -0.8
TCF4-209ENST00000544241 TMC8Q8IU68 726 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 MSRB3Q8IXL7 192 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 PHACTR4Q8IZ21 702 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 LRRC17Q8N6Y2 441 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 CHST13Q8NET6 341 aa10.03□□□□□ -0.8
TCF4-209ENST00000544241 ZNF431Q8TF32 576 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms