RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CLHC1Q8NHS4 586 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 NELL2Q99435 816 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 ACAT2Q9BWD1 397 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 PELI2Q9HAT8 420 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 STX18Q9P2W9 335 aaKnown RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 SUCOQ9UBS9 1254 aaKnown RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 FANCMQ8IYD8 2048 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 ACOT8O14734 319 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 ZNF217O75362 1048 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 AK4P27144 223 aaPredicted RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 RAB28P51157 221 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 RPS13P62277 151 aaKnown RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 YBX1P67809 324 aaKnown RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 CAPRIN1Q14444 709 aaKnown RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 CCDC6Q16204 474 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 SLC15A3Q8IY34 581 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 FRMD1Q8N878 549 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 OR2L8Q8NGY9 312 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 UBE2E3Q969T4 207 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 RAB11FIP5Q9BXF6 653 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 TMEM168Q9H0V1 697 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 PCOLCE2Q9UKZ9 415 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 RUVBL1Q9Y265 456 aaKnown RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 HEBP2Q9Y5Z4 205 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 IGHV1OR15-9A0A0B4J2B8 117 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 NME4O00746 187 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 BCAS2O75934 225 aaPredicted RBP19.1■□□□□ 0.65
COPS7A-218ENST00000543939 EML2O95834 649 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 IL6P05231 212 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 NUDT1P36639 197 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 MEF2AQ02078 507 aaPredicted RBP19.1■□□□□ 0.65
COPS7A-218ENST00000543939 ACSM2AQ08AH3 577 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 KRT33BQ14525 404 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 FAM174BQ3ZCQ3 159 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 CROCCQ5TZA2 2017 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 ACSM2BQ68CK6 577 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 SLC22A18ASQ8N1D0 253 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 FAM156AQ8NDB6 213 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 ZNF740Q8NDX6 193 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 ABHD11Q8NFV4 315 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 OR52E1Q8NGJ3 308 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 CCL4L1Q8NHW4 92 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 CHTF18Q8WVB6 975 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 RLN3Q8WXF3 142 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 SH3KBP1Q96B97 665 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 ASB9Q96DX5 294 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 TSSK3Q96PN8 268 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 TPSD1Q9BZJ3 242 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 DMRT3Q9NQL9 472 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 PRDM6Q9NQX0 595 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 TRNAU1APQ9NX07 287 aaKnown RBP19.1■□□□□ 0.65
COPS7A-218ENST00000543939 CMTM6Q9NX76 183 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 SLAMF8Q9P0V8 285 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 PCDHA9Q9Y5H5 950 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 HEATR5BQ9P2D3 2071 aa19.1■□□□□ 0.65
COPS7A-218ENST00000543939 PRAMEF33A0A0G2JMD5 474 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 RASGRP1O95267 797 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 TCN1P20061 433 aaPredicted RBP19.09■□□□□ 0.65
COPS7A-218ENST00000543939 PSMB5P28074 263 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 PIK3CBP42338 1070 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 CLNS1AP54105 237 aaKnown RBP19.09■□□□□ 0.65
COPS7A-218ENST00000543939 FLOT2Q14254 428 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 TRIM25Q14258 630 aaKnown RBP19.09■□□□□ 0.65
COPS7A-218ENST00000543939 SPANXN4Q5MJ08 99 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 DLEU7Q6UYE1 221 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 RIMKLAQ8IXN7 391 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 SIX5Q8N196 739 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 KRT78Q8N1N4 520 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 SLC13A3Q8WWT9 602 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 TMEM125Q96AQ2 219 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 TMEM74Q96NL1 305 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 ORAI3Q9BRQ5 295 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 EBPLQ9BY08 206 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 XKR8Q9H6D3 395 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 KIR3DX1Q9H7L2 352 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 S100A14Q9HCY8 104 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 ICKQ9UPZ9 632 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.09■□□□□ 0.65
COPS7A-218ENST00000543939 DGKBQ9Y6T7 804 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 PLXND1Q9Y4D7 1925 aa19.09■□□□□ 0.65
COPS7A-218ENST00000543939 PGRP06401 933 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 AP2B1P63010 937 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 RAE1P78406 368 aaKnown RBP19.08■□□□□ 0.65
COPS7A-218ENST00000543939 TMIGD1Q6UXZ0 262 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 PRR23BQ6ZRT6 265 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 DHDDSQ86SQ9 333 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 HID1Q8IV36 788 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 KIAA2013Q8IYS2 634 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 FAM160A2Q8N612 972 aaPredicted RBP19.08■□□□□ 0.65
COPS7A-218ENST00000543939 C1orf52Q8N6N3 182 aaKnown RBP19.08■□□□□ 0.65
COPS7A-218ENST00000543939 HIPK4Q8NE63 616 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 SLC26A7Q8TE54 656 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 TESCQ96BS2 214 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 EGLN2Q96KS0 407 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 GPR27Q9NS67 375 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 CUEDC1Q9NWM3 386 aaPredicted RBP19.08■□□□□ 0.65
COPS7A-218ENST00000543939 BCAP29Q9UHQ4 241 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 PPT2Q9UMR5 302 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 COLEC10Q9Y6Z7 277 aa19.08■□□□□ 0.65
COPS7A-218ENST00000543939 A0A1W2PPC4 97 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms