RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 TEX15Q9BXT5 2789 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 HIVEP3Q5T1R4 2406 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 ICE1Q9Y2F5 2266 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 ZCWPW2A0A1B0GU75 182 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 PABPN1LA6NDY0 278 aaKnown RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 E7ENX8 843 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 GFYI3L273 518 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 MASP2O00187 686 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 KIF5CO60282 957 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 NRP2O60462 931 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 ALOX12BO75342 701 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 HEXBP07686 556 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 SKIV2L2P42285 1042 aaKnown RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 MAGEA3P43357 314 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 RGS4P49798 205 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 EMP2P54851 167 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 TAP2Q03519 686 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 CDC16Q13042 620 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 MFAP5Q13361 173 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 CTBP1Q13363 440 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 CUL1Q13616 776 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 ZNF169Q14929 603 aaPredicted RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 HIF1AQ16665 826 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 CRB2Q5IJ48 1285 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 ZNF425Q6IV72 752 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 FBXO42Q6P3S6 717 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 NDUFAF7Q7L592 441 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 DENND6AQ8IWF6 608 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 PALM2Q8IXS6 379 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 PPIL6Q8IXY8 311 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 PRSS58Q8IYP2 241 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■■■□□ 19.1
RTN3-212ENST00000543123 MMABQ96EY8 250 aaPredicted RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 CNDP1Q96KN2 507 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 C5orf34Q96MH7 638 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 LMF1Q96S06 567 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 BARD1Q99728 777 aaKnown RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 TGIF2Q9GZN2 237 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 ZBTB20Q9HC78 741 aaPredicted RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 ZNF160Q9HCG1 818 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 CCDC177Q9NQR7 707 aaPredicted RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 GALPQ9UBC7 116 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 TRMT6Q9UJA5 497 aaKnown RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 RUVBL1Q9Y265 456 aaKnown RBP12.49□□□□□ -0.41
RTN3-212ENST00000543123 SLC5A6Q9Y289 635 aa12.49□□□□□ -0.41
RTN3-212ENST00000543123 IGKV1-8A0A0C4DH67 115 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 DYTNA2CJ06 578 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 IDSB3KWA1 339 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 TTC4O95801 387 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 CYC1P08574 325 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 PGAM1P18669 254 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 SLC26A3P40879 764 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 AVPR1BP47901 424 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 FAM53BQ14153 422 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 HKDC1Q2TB90 917 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 ATG9BQ674R7 924 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 UBE2R2Q712K3 238 aaPredicted RBP12.48□□□□□ -0.41
RTN3-212ENST00000543123 KCNMB4Q86W47 210 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 TMEM151BQ8IW70 566 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 GIMAP7Q8NHV1 300 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 CD200R1Q8TD46 325 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 MCOLN3Q8TDD5 553 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 ACTRT1Q8TDG2 376 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 MS4A14Q96JA4 679 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 GPR21Q99679 349 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 TRIM56Q9BRZ2 755 aaKnown RBP12.48□□□□□ -0.41
RTN3-212ENST00000543123 NAT9Q9BTE0 207 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 ABCF3Q9NUQ8 709 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 TAS2R13Q9NYV9 303 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 FBXO5Q9UKT4 447 aa12.48□□□□□ -0.41
RTN3-212ENST00000543123 CES2O00748 559 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 MED26O95402 600 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 SERPINA7P05543 415 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 C8GP07360 202 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 COX6A1P12074 109 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 ICAM2P13598 275 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 CCND1P24385 295 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 GRK3P35626 688 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 PER3P56645 1201 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 RPS15AP62244 130 aaKnown RBP12.47□□□□□ -0.41
RTN3-212ENST00000543123 YBX1P67809 324 aaKnown RBP12.47□□□□□ -0.41
RTN3-212ENST00000543123 ARG2P78540 354 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 SP140Q13342 867 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 INAQ16352 499 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 HSP90AA5PQ58FG0 334 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 VWA2Q5GFL6 755 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 ZNF549Q6P9A3 640 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 FAM180AQ6UWF9 173 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 LINC00696Q6ZRV3 163 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 MAMDC2Q7Z304 686 aaPredicted RBP12.47□□□□□ -0.41
RTN3-212ENST00000543123 PCGF5Q86SE9 256 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 CPNE9Q8IYJ1 553 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms