RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PCDHB14Q9Y5E9 798 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 TBC1D3BA6NDS4 549 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SAP18O00422 153 aaKnown RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SLC30A4O14863 429 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ACOX3O15254 700 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ZW10O43264 779 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ADH1AP07327 375 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 RETP07949 1114 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 PRKAR1AP10644 381 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 BMP7P18075 431 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SSR2P43308 183 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CDK6Q00534 326 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 PRKCZQ05513 592 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 NPRL3Q12980 569 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 MADCAM1Q13477 382 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CLCA4Q14CN2 919 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 HEPACAMQ14CZ8 416 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CYBRD1Q53TN4 286 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 LRRC66Q68CR7 880 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 TNFAIP8L2Q6P589 184 aaPredicted RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 NCCRP1Q6ZVX7 275 aaPredicted RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 C16orf62Q7Z3J2 963 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 TSPYL5Q86VY4 417 aaPredicted RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 PPP1R16AQ96I34 528 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 NAA50Q9GZZ1 169 aaKnown RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 MAGIXQ9H6Y5 334 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 C11orf16Q9NQ32 467 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CCDC177Q9NQR7 707 aaPredicted RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 TVP23BQ9NYZ1 205 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 MKLN1Q9UL63 735 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 YIPF1Q9Y548 306 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 PCDHA9Q9Y5H5 950 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CARNS1A5YM72 827 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 PI15O43692 258 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 NME6O75414 186 aaPredicted RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ATXN1LP0C7T5 689 aaKnown RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 OPRL1P41146 370 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CDK5R2Q13319 367 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CRHR2Q13324 411 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SGCGQ13326 291 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 RAPSNQ13702 412 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 APOFQ13790 326 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 C9orf64Q5T6V5 341 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 OTUD1Q5VV17 481 aaPredicted RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 TPGS2Q68CL5 300 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 TUBA3EQ6PEY2 450 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 AGTRAPQ6RW13 159 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 MBOAT1Q6ZNC8 495 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 DCP2Q8IU60 420 aaKnown RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 PHYKPLQ8IUZ5 450 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 MFSD6LQ8IWD5 586 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CXorf40AQ8TE69 158 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 RASSF5Q8WWW0 418 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 EXOSC8Q96B26 276 aaKnown RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 EFCAB11Q9BUY7 163 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ANKHQ9HCJ1 492 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 IL17CQ9P0M4 197 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 MYADML2A6NDP7 307 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 PRMT3O60678 531 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 AGXTP21549 392 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 CRHBPP24387 322 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 GJA5P36382 358 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 OR2B6P58173 313 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 SRP54P61011 504 aaKnown RBP7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 BNC1Q01954 994 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 TARDBPQ13148 414 aaKnown RBP eCLIP7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 IRF5Q13568 498 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 SPIN4Q56A73 249 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 GPRC6AQ5T6X5 926 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 ANKRD26P1Q6NSI1 321 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 SERPINA13PQ6UXR4 307 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 DCDC5Q6ZRR9 648 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 PIWIL3Q7Z3Z3 882 aaKnown RBP7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 THOC6Q86W42 341 aaKnown RBP7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 TRIM48Q8IWZ4 208 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 NPAS3Q8IXF0 933 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 NETO1Q8TDF5 533 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 GEMIN6Q8WXD5 167 aaKnown RBP7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 RAD51AP1Q96B01 352 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 PKP4Q99569 1192 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 ING3Q9NXR8 418 aa7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 TMA7Q9Y2S6 64 aaKnown RBP7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 RPL36Q9Y3U8 105 aaKnown RBP7.96□□□□□ -1.13
PRKAB1-207ENST00000542698 A0A0U1RQS6 177 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 ZNF840PA6NDX5 716 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 FABP12A6NFH5 140 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 DRGXA6NNA5 263 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 UPK3BL1B0FP48 263 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 TARM1B6A8C7 271 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 HHLA1C9JL84 531 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 UPK3BL2E5RIL1 263 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 MITFO75030 526 aaPredicted RBP7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 STC2O76061 302 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 CXCL14O95715 111 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 SBK3P0C264 359 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 SLC35G4P0C7Q5 338 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 C4BPBP20851 252 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 HNF1BP35680 557 aa7.96□□□□□ -1.14
PRKAB1-207ENST00000542698 RORCP51449 518 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms