RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 IL17CQ9P0M4 197 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 MYOFQ9NZM1 2061 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 PIKFYVEQ9Y2I7 2098 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 WDR47O94967 919 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 URODP06132 367 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 HMGA1P17096 107 aaKnown RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 EPHB3P54753 998 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 COPZ1P61923 177 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 RSBN1Q5VWQ0 802 aaPredicted RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 DESI1Q6ICB0 168 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 GATAD2AQ86YP4 633 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 BBS7Q8IWZ6 715 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 VMP1Q96GC9 406 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 MRPL9Q9BYD2 267 aaKnown RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 RMND5AQ9H871 391 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 SERHLQ9NQF3 203 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 NECTIN3Q9NQS3 549 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 DDX28Q9NUL7 540 aaKnown RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 DOCK6Q96HP0 2047 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 OR2AG2A6NM03 316 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 KRT6AP02538 564 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 KRT6BP04259 564 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 RETP07949 1114 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 KRT6CP48668 564 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 RPIAP49247 311 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 MAD2L1Q13257 205 aaPredicted RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 TIGD6Q17RP2 521 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 RFX4Q33E94 735 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 CHPFQ8IZ52 775 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 SVOPQ8N4V2 548 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 ZBTB2Q8N680 514 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 BEND7Q8N7W2 519 aaPredicted RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 RHOXF1Q8NHV9 184 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 CDK5RAP1Q96SZ6 601 aaKnown RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 DUSP21Q9H596 190 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 ABCB8Q9NUT2 735 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 GPR83Q9NYM4 423 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 ANKMY1Q9P2S6 941 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 LSM7Q9UK45 103 aaKnown RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 CLDN9O95484 217 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 CR2P20023 1033 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 DGKAP23743 735 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 HOXA9P31269 272 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 DMC1Q14565 340 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 ZNF404Q494X3 552 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 NANOGNBQ7Z5D8 188 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 LYSMD2Q8IV50 215 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 RBFAQ8N0V3 343 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 CELF2-AS1Q8N7Q2 184 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 RNF208Q9H0X6 261 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 EXOSC4Q9NPD3 245 aaKnown RBP14.85□□□□□ -0.03
CNOT9-208ENST00000542068 RAD18Q9NS91 495 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 MICAL3Q7RTP6 2002 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 NINQ8N4C6 2090 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 INPPL1O15357 1258 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 ASNA1O43681 348 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 STSP08842 583 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 COX7A2P14406 83 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 SDC1P18827 310 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 POU1F1P28069 291 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 GRK5P34947 590 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 PPP5CP53041 499 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 DAB2P98082 770 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 NCEH1Q6PIU2 408 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 SYT12Q8IV01 421 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 CACTIN-AS1Q8N1I8 211 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 DMRTB1Q96MA1 342 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 NDEL1Q9GZM8 345 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 P2RY12Q9H244 342 aa14.85□□□□□ -0.03
CNOT9-208ENST00000542068 SAMD4AQ9UPU9 718 aaKnown RBP14.85□□□□□ -0.03
CNOT9-208ENST00000542068 FAM220BPB1ANY3 271 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 ERN1O75460 977 aaKnown RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 KCNK2O95069 426 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 MFN2O95140 757 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 HIST1H2AGP0C0S8 130 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 HIST1H2ADP20671 130 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 CD70P32970 193 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 KIR3DL1P43629 444 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 NPRL3Q12980 569 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 NFATC2Q13469 925 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 TPRG1LQ5T0D9 272 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 SYT6Q5T7P8 510 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 KIAA1614Q5VZ46 1190 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 ATG9BQ674R7 924 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 NLGN4XQ8N0W4 816 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 LMNTD1Q8N9Z9 388 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 GLB1L3Q8NCI6 653 aaPredicted RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 MRPS31Q92665 395 aaKnown RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 IGSF21Q96ID5 467 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 HIST1H2AHQ96KK5 128 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 CAPNS2Q96L46 248 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 HIST1H2AJQ99878 128 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 H2AFJQ9BTM1 129 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 MTG2Q9H4K7 406 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 RAPGEFL1Q9UHV5 662 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 RNF6Q9Y252 685 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 SLC22A14Q9Y267 594 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 RGS5O15539 181 aa14.84□□□□□ -0.03
CNOT9-208ENST00000542068 WBP4O75554 376 aaKnown RBP14.84□□□□□ -0.03
CNOT9-208ENST00000542068 CD160O95971 181 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms