RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MTUS2Q5JR59 1369 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 RAB3GAP2Q9H2M9 1393 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 KIF15Q9NS87 1388 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 KIF7Q2M1P5 1343 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 IGLV5-45A0A087WSX0 123 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 SYNJ2BP-COX16A0A087WUM0 186 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ARPC4-TTLL3A0A0A6YYG9 625 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 A0A0B4J293 547 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 A4D1N5 150 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 LRRIQ3A6PVS8 624 aaPredicted RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 P2RY10O00398 339 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 NDC80O14777 642 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 IFIT3O14879 490 aaKnown RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 ZNF263O14978 683 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 NVLO15381 856 aaKnown RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 LINC01565O15544 149 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 SULT1B1O43704 296 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 SYNGR3O43761 229 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 TSC22D2O75157 780 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 PDE9AO76083 593 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 LUC7L3O95232 432 aaKnown RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 IGHV4-39P01824 125 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 MT-ND3P03897 115 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 GBAP04062 536 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ZFYP08048 801 aaPredicted RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 PNMA6AP0CW24 399 aaPredicted RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 PCP11498 1178 aaKnown RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 CSF2RAP15509 400 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 PDGFRAP16234 1089 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 CDC25CP30307 473 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 MTHFRP42898 656 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 PSMC4P43686 418 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ACADVLP49748 655 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 B2MP61769 119 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 HSPA14Q0VDF9 509 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 AP1B1Q10567 949 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 CBX3Q13185 183 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 NR1D2Q14995 579 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 MAPRE2Q15555 327 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 VWC2Q2TAL6 325 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ANKRD20A4Q4UJ75 823 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ANKRD20A8PQ5CZ79 823 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ANKRD20A2Q5SQ80 823 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ANKRD20A1Q5TYW2 823 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ANKRD20A3Q5VUR7 823 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 TEX38Q6PEX7 206 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 C11orf57Q6ZUT1 292 aaPredicted RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 Q75L30 129 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ZNF534Q76KX8 674 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 SLC26A9Q7LBE3 791 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ABI3BPQ7Z7G0 1075 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 SPATA24Q86W54 205 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 TMEM173Q86WV6 379 aaPredicted RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 TUSC5Q8IXB3 177 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 FBXO39Q8N4B4 442 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 PAPD5Q8NDF8 572 aaKnown RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 SLC24A4Q8NFF2 622 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 EXD1Q8NHP7 514 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 C9orf43Q8TAL5 461 aaPredicted RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 LRRC8CQ8TDW0 803 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 TAS1R2Q8TE23 839 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ERLEC1Q96DZ1 483 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 RPGRIP1Q96KN7 1286 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 C16orf45Q96MC5 204 aaPredicted RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 PSKH2Q96QS6 385 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 GFI1Q99684 422 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 TRMT61BQ9BVS5 477 aaKnown RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 MMP28Q9H239 520 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 SEMA6AQ9H2E6 1030 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 VCPKMTQ9H867 229 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 EQTNQ9NQ60 294 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ZFP57Q9NU63 452 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 ATXN10Q9UBB4 475 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 CACNG4Q9UBN1 327 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 PA2G4Q9UQ80 394 aaKnown RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 SH3GLB1Q9Y371 365 aa3.05□□□□□ -1.92
USP28-210ENST00000542033 BZW2Q9Y6E2 419 aaKnown RBP3.05□□□□□ -1.92
USP28-210ENST00000542033 CTTNBP2Q8WZ74 1663 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 NCOA2Q15596 1464 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 SCAF11Q99590 1463 aaKnown RBP3.04□□□□□ -1.92
USP28-210ENST00000542033 INSRP06213 1382 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 ASTN2O75129 1339 aaPredicted RBP3.04□□□□□ -1.92
USP28-210ENST00000542033 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 A0A0G2JNG1 304 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 GOLGA6L7A0A1B0GV03 622 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 LRRD1A4D1F6 860 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 OOEPA6NGQ2 149 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 PLK4O00444 970 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 SLC30A4O14863 429 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 CLIC2O15247 247 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 TEX28O15482 410 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 SMIM24O75264 130 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 CAVIN2O95810 425 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 OLFM2O95897 454 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 PAHP00439 452 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 PNPP00491 289 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 TFAP2AP05549 437 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 PRSS1P07477 247 aa3.04□□□□□ -1.92
USP28-210ENST00000542033 OR52Z1P0C646 297 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms