RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 SOCS6O14544 535 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 HS3ST1O14792 307 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 ANKRD28O15084 1053 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 ZIC3O60481 467 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 PRAMEF12O95522 483 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 SMIM18P0DKX4 95 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 FGF3P11487 239 aaPredicted RBP4.9□□□□□ -1.63
CIT-211ENST00000541841 NR1D1P20393 614 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 PSMC4P43686 418 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 SLC9A3P48764 834 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 HNRNPFP52597 415 aaKnown RBP4.9□□□□□ -1.63
CIT-211ENST00000541841 CLDN20P56880 219 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 ABATP80404 500 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 CUL3Q13618 768 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 KEAP1Q14145 624 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 LRRC38Q5VT99 294 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 FRG2Q64ET8 278 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 C18orf63Q68DL7 685 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 LPCAT2Q7L5N7 544 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 DGLUCYQ7Z3D6 616 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 ARHGAP22Q7Z5H3 698 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 SYVN1Q86TM6 617 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 RBM23Q86U06 439 aaKnown RBP4.9□□□□□ -1.63
CIT-211ENST00000541841 ZC3HC1Q86WB0 502 aaKnown RBP4.9□□□□□ -1.63
CIT-211ENST00000541841 GCSAMQ8N6F7 178 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 LMO3Q8TAP4 145 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 FAM216AQ8WUB2 273 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 SLC44A1Q8WWI5 657 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 FIG4Q92562 907 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 TAAR8Q969N4 342 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 C16orf58Q96GQ5 468 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 FAM84BQ96KN1 310 aaPredicted RBP4.9□□□□□ -1.63
CIT-211ENST00000541841 ASCL2Q99929 193 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 WDR77Q9BQA1 342 aaPredicted RBP4.9□□□□□ -1.63
CIT-211ENST00000541841 DCLK3Q9C098 648 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 DDX47Q9H0S4 455 aaKnown RBP4.9□□□□□ -1.63
CIT-211ENST00000541841 RAB17Q9H0T7 212 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 KCNMB3Q9NPA1 279 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 CENPMQ9NSP4 180 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 NPAP1Q9NZP6 1156 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 EXTL2Q9UBQ6 330 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 UBQLN2Q9UHD9 624 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 KIF3AQ9Y496 699 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.9□□□□□ -1.63
CIT-211ENST00000541841 TAF1P21675 1872 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 USP47Q96K76 1375 aa4.9□□□□□ -1.63
CIT-211ENST00000541841 CROCC2H7BZ55 1655 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 SPATA31E1Q6ZUB1 1445 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 TIMM23O14925 209 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 KCNN4O15554 427 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 HSPA12AO43301 675 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 LUC7L3O95232 432 aaKnown RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 CHRNB2P17787 502 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 DNAJB1P25685 340 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 PIK3R1P27986 724 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 CCND2P30279 289 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 AKT2P31751 481 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 DSCR9P59020 149 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 SELENOVP59797 346 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 ROR2Q01974 943 aaKnown RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 PNRC1Q12796 327 aaPredicted RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 SPP2Q13103 211 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 SHROOM1Q2M3G4 852 aaPredicted RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 DCAF6Q58WW2 860 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 LDLRAP1Q5SW96 308 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 FAM46CQ5VWP2 391 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 NADSYN1Q6IA69 706 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 IRGCQ6NXR0 463 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 KCTD18Q6PI47 426 aaPredicted RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 AFTPHQ6ULP2 937 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 PLEKHM3Q6ZWE6 761 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 CENPQQ7L2Z9 268 aaPredicted RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 ASPGQ86U10 573 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 SLC5A8Q8N695 610 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 SLC35F5Q8WV83 523 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 SMPDL3BQ92485 455 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 TRIB2Q92519 343 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 ARHGAP45Q92619 1136 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 THRSPQ92748 146 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 WBP2Q969T9 261 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 MYADMQ96S97 322 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 PCYT2Q99447 389 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 DDX50Q9BQ39 737 aaKnown RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 SLX1AQ9BQ83 275 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 CUEDC2Q9H467 287 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 UPF2Q9HAU5 1272 aaKnown RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 HIF1ANQ9NWT6 349 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 NDUFA13Q9P0J0 144 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 FBXL2Q9UKC9 423 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 TSPAN16Q9UKR8 245 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 WDR37Q9Y2I8 494 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 GRIP1Q9Y3R0 1128 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 SNX9Q9Y5X1 595 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 EIF2AK4Q9P2K8 1649 aaKnown RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 LRPPRCP42704 1394 aaKnown RBP4.89□□□□□ -1.63
CIT-211ENST00000541841 ANKRD30BQ9BXX2 1392 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 NINLQ9Y2I6 1382 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 DAPK1P53355 1430 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 KIAA1107Q9UPP5 1409 aa4.89□□□□□ -1.63
CIT-211ENST00000541841 MBD5Q9P267 1494 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms