RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PRPS1L1P21108 318 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 VAMP1P23763 118 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 BMP8BP34820 402 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 MTPNP58546 118 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 VWA5B1Q5TIE3 1220 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 ZNF776Q68DI1 518 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-204ENST00000541819 ZNF662Q6ZS27 426 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 BMP8AQ7Z5Y6 402 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 RIOK2Q9BVS4 552 aaKnown RBP10.48□□□□□ -0.73
GABRB3-204ENST00000541819 FXYD6Q9H0Q3 95 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 DPEP3Q9H4B8 488 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 VNN3Q9NY84 501 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 GNG8Q9UK08 70 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 FBXW11Q9UKB1 542 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 FZD4Q9ULV1 537 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 NOP16Q9Y3C1 178 aaKnown RBP10.48□□□□□ -0.73
GABRB3-204ENST00000541819 MADDQ8WXG6 1647 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 FRMPD1Q5SYB0 1578 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 ACOX3O15254 700 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 IRAK2O43187 625 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 VEGFDO43915 354 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 PEX14O75381 377 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 ARL6IP5O75915 188 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 ZBTB48P10074 688 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-204ENST00000541819 NPR2P20594 1047 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 OR2B6P58173 313 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 BLMHQ13867 455 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 ABRAXAS2Q15018 415 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 USF2Q15853 346 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-204ENST00000541819 TMCO2Q7Z6W1 182 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-204ENST00000541819 MMAAQ8IVH4 418 aaKnown RBP10.48□□□□□ -0.73
GABRB3-204ENST00000541819 PHOSPHO1Q8TCT1 267 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 HBEGFQ99075 208 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 SUV39H2Q9H5I1 410 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 MKLN1Q9UL63 735 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 ABCG2Q9UNQ0 655 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 STXBP5LQ9Y2K9 1186 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 PCDHGA6Q9Y5G7 932 aa10.48□□□□□ -0.73
GABRB3-204ENST00000541819 ARHGAP23Q9P227 1491 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 A6NCN8 305 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 BTBD19C9JJ37 291 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 INHAP05111 366 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 HOXB9P17482 250 aaPredicted RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 RPL17P18621 184 aaKnown RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 CFL1P23528 166 aaKnown RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 FMO3P31513 532 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 VIPR1P32241 457 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 HYAL2Q12891 473 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 OGFOD2Q6N063 350 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ASB18Q6ZVZ8 466 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 SCGB1C1Q8TD33 95 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 THRSPQ92748 146 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 IRF2BPLQ9H1B7 796 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ACTL8Q9H568 366 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 FLRT1Q9NZU1 646 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 VPS29Q9UBQ0 182 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 POFUT2Q9Y2G5 429 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 SNX10Q9Y5X0 201 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 IRF2P14316 349 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 AIMP2Q13155 320 aaKnown RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ADAM15Q13444 863 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 SEC23BQ15437 767 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 FSTL4Q6MZW2 842 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 MON1BQ7L1V2 547 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 CLNKQ7Z7G1 428 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 OR56A1Q8NGH5 318 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 CPT1BQ92523 772 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 CAPNS2Q96L46 248 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 EIF2B3Q9NR50 452 aaKnown RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 UCKL1Q9NWZ5 548 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 TGFB1P01137 390 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 H1F0P07305 194 aaKnown RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ACRP10323 421 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 IDH3AP50213 366 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 DUSP3P51452 185 aaPredicted RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 MERTKQ12866 999 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 MBLAC2Q68D91 279 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 CELF5Q8N6W0 485 aaKnown RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ZNF781Q8N8C0 355 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 RAB2BQ8WUD1 216 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 NR4A3Q92570 626 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 PCDHB18PQ96TA0 734 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ZNF226Q9NYT6 803 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 NCOA3Q9Y6Q9 1424 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 J3QLW9 94 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 SLC22A2O15244 555 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 C4BPAP04003 597 aaKnown RBP10.47□□□□□ -0.73
GABRB3-204ENST00000541819 BCHEP06276 602 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 CDH1P12830 882 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ZNF19P17023 458 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 PTGS2P35354 604 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 PON3Q15166 354 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 NIPAL1Q6NVV3 410 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 ARL9Q6T311 187 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 KCNC2Q96PR1 638 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 FN3KQ9H479 309 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 TOR3AQ9H497 397 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 CXorf21Q9HAI6 301 aa10.47□□□□□ -0.73
GABRB3-204ENST00000541819 FAM170BA6NMN3 283 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms