RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ZNF705BP0CI00 300 aaPredicted RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 HTR7P34969 479 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 NKX6-1P78426 367 aaPredicted RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 VASH1Q7L8A9 365 aaPredicted RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 C7orf26Q96N11 449 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 ZNF578Q96N58 590 aaPredicted RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 KCNQ5Q9NR82 932 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 PTGR1Q14914 329 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 SDHAF4Q5VUM1 108 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 MAPKAP1Q9BPZ7 522 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 DUS2Q9NX74 493 aaKnown RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 SRPRAP08240 638 aaKnown RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 MRPL41Q8IXM3 137 aaKnown RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 TOP6BLQ8N6T0 577 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 TCTEX1D2Q8WW35 142 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 HERVK_113Q902F9 699 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 ALPK1Q96QP1 1244 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 ACO2Q99798 780 aaKnown RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 SNX10Q9Y5X0 201 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 A0A1W2PPL8 197 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 C1orf196B1AJZ1 125 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 H3BSH0 61 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 KCNQ2O43526 872 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 GTF2F2P13984 249 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 RPS3P23396 243 aaKnown RBP eCLIP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 RPS14P62263 151 aaKnown RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 ODF4Q2M2E3 257 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 DENND1AQ8TEH3 1009 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 USB1Q9BQ65 265 aaKnown RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 ATG5Q9H1Y0 275 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 F5H0A9 414 aaPredicted RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 CD3GP09693 182 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 GP1BBP13224 206 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 CDK2P24941 298 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 MBOAT1Q6ZNC8 495 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 TMCO2Q7Z6W1 182 aaPredicted RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 C12orf45Q8N5I9 185 aaPredicted RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 BBS1Q8NFJ9 593 aa14.99□□□□□ -0.01
HMGA2-210ENST00000541363 NUFIP1Q9UHK0 495 aaKnown RBP14.99□□□□□ -0.01
HMGA2-210ENST00000541363 SAP18O00422 153 aaKnown RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 NPHS1O60500 1241 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 H1F0P07305 194 aaKnown RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 C8BP07358 591 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 CDKN2CP42773 168 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 RRAS2P62070 204 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 TRAM1Q15629 374 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 NTRK2Q16620 822 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 AMZ1Q400G9 498 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 SLC6A7Q99884 636 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 POLMQ9NP87 494 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 RNF19AQ9NV58 838 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 SLC22A2O15244 555 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 NUDT7P0C024 238 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 DSTNP60981 165 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 CDK3Q00526 305 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 UGT8Q16880 541 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 TATDN1Q6P1N9 297 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 SERPINA9Q86WD7 417 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 TMEM80Q96HE8 168 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 NIFKQ9BYG3 293 aaKnown RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 METTL7AQ9H8H3 244 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 ASB6Q9NWX5 421 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 KIF20BQ96Q89 1820 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 TMEM150BA6NC51 233 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 PIP5K1BO14986 540 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 GRID2O43424 1007 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 PCDH7O60245 1069 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 ALDH3B1P43353 468 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 IDH3AP50213 366 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 RTP1P59025 263 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 MYO18AQ92614 2054 aaKnown RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 A0A1B0GVT2 93 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 C2orf72A6NCS6 295 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 MTPNP58546 118 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 EVLQ9UI08 416 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 A0A1W2PRB8 838 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 SYNGR4O95473 234 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 HLA-DPB1P04440 258 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 CNTN2Q02246 1040 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 SPHKAPQ2M3C7 1700 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 ARL13AQ5H913 290 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 PAOXQ6QHF9 649 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 SLC13A3Q8WWT9 602 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 DNAJC5Q9H3Z4 198 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 LRRC4CQ9HCJ2 640 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 CTPS2Q9NRF8 586 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 ENAMQ9NRM1 1142 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 ZNF701Q9NV72 531 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 LGR5O75473 907 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 POP4O95707 220 aaKnown RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 MPP1Q00013 466 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 CCDC58Q4VC31 144 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 LPPQ93052 612 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 SLC35C1Q96A29 364 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 FLRT1Q9NZU1 646 aa14.98□□□□□ -0.01
HMGA2-210ENST00000541363 DNMT3AQ9Y6K1 912 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-210ENST00000541363 A8MXE2 369 aa14.97□□□□□ -0.01
HMGA2-210ENST00000541363 RAC2P15153 192 aa14.97□□□□□ -0.01
HMGA2-210ENST00000541363 C12orf29Q8N999 325 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms