RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 MAPKAPK3Q16644 382 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 DPY19L1Q2PZI1 675 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 CDKL4Q5MAI5 379 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 SPANXN2Q5MJ10 180 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 C6orf136Q5SQH8 315 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 RBM20Q5T481 1227 aaKnown RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 FAM72AQ5TYM5 149 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 MANEALQ5VSG8 457 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 FAM72DQ6L9T8 149 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 ARMCX6Q7L4S7 300 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 ADAMTSL2Q86TH1 951 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 FAM72BQ86X60 149 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 MICU2Q8IYU8 434 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 DEPDC4Q8N2C3 294 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 TMEM132CQ8N3T6 1108 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 FRMD1Q8N878 549 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 SIMC1Q8NDZ2 872 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 MCOLN3Q8TDD5 553 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 SLC38A4Q969I6 547 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 LGALS12Q96DT0 336 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 C3orf30Q96M34 536 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 SLC39A3Q9BRY0 314 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 EDEM2Q9BV94 578 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 ITPAQ9BY32 194 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 POLR1EQ9GZS1 481 aaKnown RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 MUC3BQ9H195 1237 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 DSN1Q9H410 356 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 SP110Q9HB58 689 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 OLA1Q9NTK5 396 aaKnown RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 PLCXD1Q9NUJ7 323 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 DCAF13Q9NV06 445 aaKnown RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 UBP1Q9NZI7 540 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 ADGRE2Q9UHX3 823 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 INTS6Q9UL03 887 aaKnown RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 CORO2BQ9UQ03 480 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 PCDHGA8Q9Y5G5 932 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 CORINQ9Y5Q5 1042 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 HEMK1Q9Y5R4 338 aaPredicted RBP10.11□□□□□ -0.79
CHFR-219ENST00000541341 AKAP13Q12802 2813 aa10.11□□□□□ -0.79
CHFR-219ENST00000541341 CNOT1A5YKK6 2376 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 CHD5Q8TDI0 1954 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 TRAV19A0A0A6YYK7 116 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 C2orf81A6NN90 581 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 A8MVJ9 347 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 C1QTNF9BB2RNN3 333 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 H3BMM5 538 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 CXCR6O00574 342 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 TM4SF5O14894 197 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 RAD51BO15315 384 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 HS6ST1O60243 411 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 MPZL2O60487 215 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 RHOBTB1O94844 696 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 MT-CYBP00156 380 aaPredicted RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 HLA-DQB2P05538 268 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 C1QTNF9P0C862 333 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 MTHFD1P11586 935 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 PRPS2P11908 318 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 TCF3P15923 654 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 HDCP19113 662 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 EFNA1P20827 205 aaPredicted RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 DRD1P21728 446 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 PPIBP23284 216 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 IGFBP5P24593 272 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 HRH2P25021 359 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 ACVR2AP27037 513 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 DNAJA1P31689 397 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 KRT20P35900 424 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 ETV6P41212 452 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 EIF2DP41214 584 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 NOVA1P51513 510 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 PLK1P53350 603 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 SLC35A2P78381 396 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 IL5RAQ01344 420 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 EMX1Q04741 257 aaPredicted RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 CYP4F3Q08477 520 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 CD47Q08722 323 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 VAC14Q08AM6 782 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 ABHD18Q0P651 414 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 KCNAB2Q13303 367 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 GRB7Q14451 532 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 EIF4HQ15056 248 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 PCBP2Q15366 365 aaKnown RBP eCLIP10.1□□□□□ -0.793e-7■□□□□ 9.9
CHFR-219ENST00000541341 NPTX1Q15818 432 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 ZNF77Q15935 545 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 RBBP7Q16576 425 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 UAP1L1Q3KQV9 507 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 TTLL9Q3SXZ7 439 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 FUT11Q495W5 492 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 INO80DQ53TQ3 878 aaPredicted RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 PLA2G2CQ5R387 149 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 HECTD3Q5T447 861 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 UBE2UQ5VVX9 321 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 TMEM214Q6NUQ4 689 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 CYHR1Q6ZMK1 362 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 GDPGP1Q6ZNW5 385 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 FAM92BQ6ZTR7 304 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 SNX20Q7Z614 316 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 SLC22A16Q86VW1 577 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 ARHGAP12Q8IWW6 846 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 MFSD4AQ8N468 514 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms