RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 KLHDC7BQ96G42 594 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 RPP25Q9BUL9 199 aaKnown RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 VN1R3Q9BXE9 311 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 MARCH7Q9H992 704 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ZDHHC7Q9NXF8 308 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 IKZF3Q9UKT9 509 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ZNF451Q9Y4E5 1061 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 NRXN2Q9P2S2 1712 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 KMOO15229 486 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 MATN4O95460 622 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 BCKDHAP12694 445 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 AOC1P19801 751 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ARNTP27540 789 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 CHN2P52757 468 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 COPZ1P61923 177 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 LASP1Q14847 261 aaKnown RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ZNHIT3Q15649 155 aaPredicted RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 GPR107Q5VW38 600 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 MLIPQ5VWP3 458 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 KHDRBS2Q5VWX1 349 aaKnown RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 SMARCD3Q6STE5 483 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ZNF605Q86T29 641 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ZDHHC21Q8IVQ6 265 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 CLECL1Q8IZS7 167 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 C11orf65Q8NCR3 313 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 FAM3CQ92520 227 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 SLC35A5Q9BS91 424 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 NUSAP1Q9BXS6 441 aaKnown RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 TRIM39Q9HCM9 518 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ITM2CQ9NQX7 267 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 GIN1Q9NXP7 522 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ATXN10Q9UBB4 475 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 OR6C74A6NCV1 312 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 BBIP1A8MTZ0 92 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 K7ESM1 405 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 GTPBP1O00178 669 aaKnown RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 HNRNPRO43390 633 aaKnown RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 GSRP00390 522 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 CCNYL3P0C7X3 344 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 T-ENOLP0DO92 83 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 PRPS2P11908 318 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 ASMTP46597 345 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 EIF3MQ7L2H7 374 aaKnown RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 VRK3Q8IV63 474 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 MFSD6LQ8IWD5 586 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 TRAM1L1Q8N609 369 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 GPR151Q8TDV0 419 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 PIGKQ92643 395 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 CCDC106Q9BWC9 280 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 TPK1Q9H3S4 243 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 KCNK13Q9HB14 408 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 DZANK1Q9NVP4 752 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 MAGEL2Q9UJ55 1249 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 PCTPQ9UKL6 214 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 PPIEQ9UNP9 301 aaKnown RBP9.25□□□□□ -0.93
TTC39C-203ENST00000540918 SHROOM3Q8TF72 1996 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 QSER1Q2KHR3 1735 aa9.25□□□□□ -0.93
TTC39C-203ENST00000540918 WASH4PA8MWX3 477 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 CNOT3O75175 753 aaKnown RBP9.24□□□□□ -0.93
TTC39C-203ENST00000540918 LHCGRP22888 699 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 RPL4P36578 427 aaKnown RBP9.24□□□□□ -0.93
TTC39C-203ENST00000540918 TRPC1P48995 793 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 HNMTP50135 292 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 IST1P53990 364 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 TAS2R41P59536 307 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 RPS21P63220 83 aaKnown RBP9.24□□□□□ -0.93
TTC39C-203ENST00000540918 MTAPQ13126 283 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 CTSL3PQ5NE16 218 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 NANOGP8Q6NSW7 305 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 NOXRED1Q6NXP6 359 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 SFRP1Q8N474 314 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 HUS1BQ8NHY5 278 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 RORBQ92753 470 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 APIPQ96GX9 242 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 DPYSL5Q9BPU6 564 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 EFCAB11Q9BUY7 163 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 GSTO2Q9H4Y5 243 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 NANOGQ9H9S0 305 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 LMAN1LQ9HAT1 526 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 SEMA3GQ9NS98 782 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 STARD5Q9NSY2 213 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 CACNA1IQ9P0X4 2223 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 A0A1W2PP18 115 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 BCHEP06276 602 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 EBLN1P0CF75 366 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 IL1RNP18510 177 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 MAGEA6P43360 314 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 CLCN4P51793 760 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 VSX2P58304 361 aaPredicted RBP9.24□□□□□ -0.93
TTC39C-203ENST00000540918 PTSQ03393 145 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 ZNF155Q12901 538 aaPredicted RBP9.24□□□□□ -0.93
TTC39C-203ENST00000540918 CCSMST1Q4G0I0 132 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 EOGTQ5NDL2 527 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 MAL2Q969L2 176 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 MPP4Q96JB8 637 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 DHRS4Q9BTZ2 278 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 C3orf14Q9HBI5 128 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 SLAMF8Q9P0V8 285 aa9.24□□□□□ -0.93
TTC39C-203ENST00000540918 C3orf18Q9UK00 162 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms