RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 EGLN2Q96KS0 407 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 PRAP1Q96NZ9 151 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 NECAB3Q96P71 396 aaPredicted RBP23.64■■□□□ 1.37
TTC3-225ENST00000540756 WASH6PQ9NQA3 447 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 SPHK1Q9NYA1 384 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 VPS29Q9UBQ0 182 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 NDUFAF1Q9Y375 327 aa23.64■■□□□ 1.37
TTC3-225ENST00000540756 KCNK10P57789 538 aa23.63■■□□□ 1.37
TTC3-225ENST00000540756 CSTF3Q12996 717 aaKnown RBP23.63■■□□□ 1.37
TTC3-225ENST00000540756 LAS2Q8IYD9 372 aa23.63■■□□□ 1.37
TTC3-225ENST00000540756 GJD3Q8N144 294 aa23.63■■□□□ 1.37
TTC3-225ENST00000540756 CAMKK1Q8N5S9 505 aa23.63■■□□□ 1.37
TTC3-225ENST00000540756 MIR1-1HGQ9H1L0 117 aa23.63■■□□□ 1.37
TTC3-225ENST00000540756 SLAMF8Q9P0V8 285 aa23.63■■□□□ 1.37
TTC3-225ENST00000540756 DMDP11532 3685 aa23.63■■□□□ 1.37
TTC3-225ENST00000540756 IGKV1-8A0A0C4DH67 115 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 FAM234BA2RU67 622 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 ANGPT2O15123 496 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 F3P13726 295 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 CD27P26842 260 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 PEBP1P30086 187 aaKnown RBP23.62■■□□□ 1.37
TTC3-225ENST00000540756 ILF3Q12906 894 aaKnown RBP eCLIP23.62■■□□□ 1.37
TTC3-225ENST00000540756 MAD2L1Q13257 205 aaPredicted RBP23.62■■□□□ 1.37
TTC3-225ENST00000540756 SMU1Q2TAY7 513 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 CACHD1Q5VU97 1274 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 VN1R5Q7Z5H4 357 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 OR4E2Q8NGC2 313 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 OR2A1Q8NGT9 310 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 OR2L8Q8NGY9 312 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 GPBAR1Q8TDU6 330 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 TSSK3Q96PN8 268 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 SPAG17Q6Q759 2223 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 WDFY4Q6ZS81 3184 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 CROCCQ5TZA2 2017 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 A0A1W2PP18 115 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 FEZF1A0PJY2 475 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 SAP18O00422 153 aaKnown RBP23.62■■□□□ 1.37
TTC3-225ENST00000540756 MAP3K13O43283 966 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 SDC1P18827 310 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 PSME3P61289 254 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 TLR1Q15399 786 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 TMEFF1Q8IYR6 380 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 FBXW8Q8N3Y1 598 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 HSPA12BQ96MM6 686 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 TRIM8Q9BZR9 551 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 ASIC5Q9NY37 505 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 TAAR2Q9P1P5 351 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 COLEC10Q9Y6Z7 277 aa23.62■■□□□ 1.37
TTC3-225ENST00000540756 CCDC154A6NI56 674 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 ZNF839A8K0R7 811 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 NPIPB8E9PQR5 432 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 TGFB1P01137 390 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 JAK1P23458 1154 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 MTTPP55157 894 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 IRX1P78414 480 aaPredicted RBP23.61■■□□□ 1.37
TTC3-225ENST00000540756 CEACAM7Q14002 265 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 CAPRIN1Q14444 709 aaKnown RBP23.61■■□□□ 1.37
TTC3-225ENST00000540756 PAGE2BQ5JRK9 111 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 NOXRED1Q6NXP6 359 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 BNC2Q6ZN30 1099 aaPredicted RBP23.61■■□□□ 1.37
TTC3-225ENST00000540756 GPR156Q8NFN8 814 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 KIR3DX1Q9H7L2 352 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 BRF2Q9HAW0 419 aa23.61■■□□□ 1.37
TTC3-225ENST00000540756 A0A1W2PR77 199 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 NUDT1P36639 197 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 RBBP5Q15291 538 aaKnown RBP23.6■■□□□ 1.37
TTC3-225ENST00000540756 ICE2Q659A1 982 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 C8orf82Q6P1X6 216 aaPredicted RBP23.6■■□□□ 1.37
TTC3-225ENST00000540756 SLC2A7Q6PXP3 512 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 TMIGD1Q6UXZ0 262 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 PACS2Q86VP3 889 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 PLD3Q8IV08 490 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 RAB42Q8N4Z0 105 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 GFM2Q969S9 779 aaKnown RBP23.6■■□□□ 1.37
TTC3-225ENST00000540756 OR51B5Q9H339 312 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 HEBP2Q9Y5Z4 205 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 BBIP1A8MTZ0 92 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 FXYD1O00168 92 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 LRATO95237 230 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 RIPK1Q13546 671 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 HIST2H2ACQ16777 129 aaPredicted RBP23.6■■□□□ 1.37
TTC3-225ENST00000540756 HIST2H2AA3Q6FI13 130 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 PARGQ86W56 976 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 ANKRD53Q8N9V6 530 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 FAM156AQ8NDB6 213 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 ABHD11Q8NFV4 315 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 CADM4Q8NFZ8 388 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 CXorf40BQ96DE9 158 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 C11orf24Q96F05 449 aaPredicted RBP23.6■■□□□ 1.37
TTC3-225ENST00000540756 DPY30Q9C005 99 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 DMRT3Q9NQL9 472 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 DLGAP2Q9P1A6 1054 aa23.6■■□□□ 1.37
TTC3-225ENST00000540756 PRICKLE3O43900 615 aaPredicted RBP23.59■■□□□ 1.37
TTC3-225ENST00000540756 CD38P28907 300 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 RAE1P78406 368 aaKnown RBP23.59■■□□□ 1.37
TTC3-225ENST00000540756 PLIN5Q00G26 463 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 ZNF33BQ06732 778 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 PIGGQ5H8A4 983 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 C1orf146Q5VVC0 180 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms