RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 YAF2Q8IY57 180 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 ARL10Q8N8L6 244 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 OR7G3Q8NG95 312 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 CNIH3Q8TBE1 160 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 CSGALNACT1Q8TDX6 532 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 CXorf40AQ8TE69 158 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 SNRNP27Q8WVK2 155 aaKnown RBP16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 ATL1Q8WXF7 558 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 NUS1Q96E22 293 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 REXO5Q96IC2 774 aaKnown RBP16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 OCEL1Q9H607 264 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 TPT1P8Q9HAU6 139 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 PCDHGA11Q9Y5H2 935 aa16.52■□□□□ 0.24
EPB41L3-204ENST00000540638 TRBV23OR9-2A0A075B6M9 112 aa16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 SCELO95171 688 aa16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 C6P13671 934 aa16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 PFKLP17858 780 aa16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 DUS1LQ6P1R4 473 aaKnown RBP16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 KAT8Q9H7Z6 458 aaKnown RBP16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 PTTG2Q9NZH5 202 aa16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 FZD4Q9ULV1 537 aa16.52■□□□□ 0.23
EPB41L3-204ENST00000540638 MICAL3Q7RTP6 2002 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 H0Y858 1186 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 DLGAP1O14490 977 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 MOSPD3O75425 235 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 PRPS1L1P21108 318 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 POU1F1P28069 291 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 PIGAP37287 484 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 LSAMPQ13449 338 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 BIRC2Q13490 618 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 R3HCC1LQ7Z5L2 792 aaKnown RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 FAM124AQ86V42 546 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 TRAM1L1Q8N609 369 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 SMYD1Q8NB12 490 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 USP7Q93009 1102 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 LYSMD1Q96S90 227 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 UHRF1Q96T88 793 aaPredicted RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 TM7SF3Q9NS93 570 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 THG1LQ9NWX6 298 aaKnown RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 RHBDL2Q9NX52 303 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 BRWD1Q9NSI6 2320 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 RAD23AP54725 363 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 UAP1L1Q3KQV9 507 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 FAM109BQ6ICB4 259 aaPredicted RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 MED27Q6P2C8 311 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 THAP5Q7Z6K1 395 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 HMGN2P46Q86SG4 172 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 C12orf43Q96C57 262 aaKnown RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 SAMD11Q96NU1 681 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 CEP44Q9C0F1 390 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 KCNH6Q9H252 994 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 NTN4Q9HB63 628 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 RC3H2Q9HBD1 1191 aaKnown RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 IMP3Q9NV31 184 aaKnown RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 CEPT1Q9Y6K0 416 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 OTOL1A6NHN0 477 aaPredicted RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 PDZK1P1A8MUH7 402 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 GFRA2O00451 464 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 PRNPP04156 253 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 IGFBP5P24593 272 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 IMPA1P29218 277 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 SPDYE7PQ495Y7 208 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 FAM217AQ8IXS0 508 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 ZNF480Q8WV37 535 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 NRBF2Q96F24 287 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 OTUB1Q96FW1 271 aaPredicted RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 PAIP1Q9H074 479 aaKnown RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 TRIM39Q9HCM9 518 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 C3orf18Q9UK00 162 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 ABCG2Q9UNQ0 655 aa16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 RUVBL1Q9Y265 456 aaKnown RBP16.51■□□□□ 0.23
EPB41L3-204ENST00000540638 ARHGEF15O94989 841 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 PAK4O96013 591 aaPredicted RBP16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 NPPAP01160 153 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 MYF6P23409 242 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 IDH2P48735 452 aaKnown RBP16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 OCA2Q04671 838 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 UGT8Q16880 541 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 XKR5Q6UX68 686 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 TMEM179BQ7Z7N9 219 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 PACRGLQ8N7B6 248 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 VN1R2Q8NFZ6 395 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 UTP15Q8TED0 518 aaKnown RBP16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 BARD1Q99728 777 aaKnown RBP16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 OR1A2Q9Y585 309 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 CLCN2P51788 898 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 CNTN1Q12860 1018 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 PPIGQ13427 754 aaKnown RBP eCLIP16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 KIAA0040Q15053 153 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 PSRC1Q6PGN9 363 aaPredicted RBP16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 CELF5Q8N6W0 485 aaKnown RBP16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 BPIFB1Q8TDL5 484 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 PYURFQ96I23 114 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 OR4K3Q96R72 315 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 PCDHGA8Q9Y5G5 932 aa16.5■□□□□ 0.23
EPB41L3-204ENST00000540638 PIM1P11309 404 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms