RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 EXOSC2Q13868 293 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 NKG7Q16617 165 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 DUSP6Q16828 381 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 CDO1Q16878 200 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 FAM83EQ2M2I3 478 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 COQ5Q5HYK3 327 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 PAGE3Q5JUK9 113 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 METTL11BQ5VVY1 283 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 TMPRSS11AQ6ZMR5 421 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 MRPL10Q7Z7H8 261 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC41A1Q8IVJ1 513 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 ZSWIM3Q96MP5 696 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC9A7Q96T83 725 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 NPAS1Q99742 590 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 C1QTNF6Q9BXI9 259 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 PRDM5Q9NQX1 630 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 COA4Q9NYJ1 87 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 SLAMF8Q9P0V8 285 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 UTS2RQ9UKP6 389 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 ACOT9Q9Y305 439 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 KCNMB2Q9Y691 235 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 TET1Q8NFU7 2136 aa9.21□□□□□ -0.94
CTNNA1-243ENST00000540387 A0A0A0MRY4 1105 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ASPDHA6ND91 283 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ANKRD28O15084 1053 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 LDOC1O95751 146 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CDK1P06493 297 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ANXA6P08133 673 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 EFNA1P20827 205 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 NUP62P37198 522 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CLCN7P51798 805 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 RRAS2P62070 204 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CDH17Q12864 832 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 RFX4Q33E94 735 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 IQCCQ4KMZ1 466 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CAPN13Q6MZZ7 669 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 BLOC1S3Q6QNY0 202 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 PLET1Q6UQ28 207 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ENPP6Q6UWR7 440 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC24A5Q71RS6 500 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 GLCCI1Q86VQ1 547 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CLHC1Q8NHS4 586 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 IPCEF1Q8WWN9 437 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 RXFP2Q8WXD0 754 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 TRIM43Q96BQ3 446 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 SPATA13Q96N96 652 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 QKIQ96PU8 341 aaKnown RBP eCLIP9.2□□□□□ -0.949e-7■■■■■ 26.9
CTNNA1-243ENST00000540387 BCL2L14Q9BZR8 327 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 XYLT2Q9H1B5 865 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 RIBC2Q9H4K1 309 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ZCCHC4Q9H5U6 513 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 C3orf14Q9HBI5 128 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 GOLGA2P5Q9HBQ8 144 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 SIRT5Q9NXA8 310 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 A0A0A6YYJ9 748 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ARL5CA6NH57 179 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 C2orf81A6NN90 581 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 WWP2O00308 870 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 PPEF2O14830 753 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 MATN4O95460 622 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 F9P00740 461 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 GLAP06280 429 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ACSM4P0C7M7 580 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 SRCP12931 536 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 KCNE1P15382 129 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ZNF37AP17032 561 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 PFKLP17858 780 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CASP2P42575 452 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 YWHAEP62258 255 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CYP4F2P78329 520 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 SOX4Q06945 474 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CYP4F3Q08477 520 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 GRB7Q14451 532 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 LARS2Q15031 903 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 SAXO2Q658L1 398 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 SCYL2Q6P3W7 929 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CCDC149Q6ZUS6 474 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 KCNMB4Q86W47 210 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 KRT73Q86Y46 540 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 OR5K1Q8NHB7 308 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 ZNF431Q8TF32 576 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC9A6Q92581 669 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 VWCEQ96DN2 955 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 EIF2B3Q9NR50 452 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 CACNG4Q9UBN1 327 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 GLS2Q9UI32 602 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 LIPT1Q9Y234 373 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 PKP3Q9Y446 797 aa9.2□□□□□ -0.94
CTNNA1-243ENST00000540387 A0A096LPI6 279 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 E9PAM4 449 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 UBFD1O14562 309 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 PLA2G10O15496 165 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 FABP7O15540 132 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 WDR47O94967 919 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 FHP07954 510 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CSF3P09919 207 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 TSPAN8P19075 237 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 CD72P21854 359 aa9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 C21orf33P30042 268 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-243ENST00000540387 ZNF143P52747 638 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms