RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 DNTTP04053 509 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 PRKCGP05129 697 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 GEMP55040 296 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 ABATP80404 500 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 NR6A1Q15406 480 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 UAP1L1Q3KQV9 507 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 USP39Q53GS9 565 aaKnown RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 INO80DQ53TQ3 878 aaPredicted RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 BRMS1LQ5PSV4 323 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 ANKS6Q68DC2 871 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 TXNDC8Q6A555 127 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 USP51Q70EK9 711 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 PLCZ1Q86YW0 608 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 HID1Q8IV36 788 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 B3GALNT2Q8NCR0 500 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 GALNT11Q8NCW6 608 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 MYLPFQ96A32 169 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 VAT1Q99536 393 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 CCDC32Q9BV29 185 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 KCNH6Q9H252 994 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 FAM83DQ9H4H8 585 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 ZNF385DQ9H6B1 395 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 SYTL2Q9HCH5 934 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 MRPL39Q9NYK5 338 aaKnown RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 POLG2Q9UHN1 485 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 NCF1BA6NI72 391 aaPredicted RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 NCF1CA8MVU1 366 aaPredicted RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 A8MX80 341 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 SCO1O75880 301 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 PDGFAP04085 211 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 NCF1P14598 390 aaPredicted RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 SDHBP21912 280 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 RPS3P23396 243 aaKnown RBP eCLIP8.45□□□□□ -1.063e-7■■■□□ 17.7
DDB1-217ENST00000540166 PLA2G5P39877 138 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 PPP3CCP48454 512 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 OR4D2P58180 307 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 DNAJB13P59910 316 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 DUSP7Q16829 419 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 INTS6LQ5JSJ4 861 aaKnown RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 TANGO2Q6ICL3 276 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 KIAA1324Q6UXG2 1013 aaKnown RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 GCNT7Q6ZNI0 430 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 CLEC14AQ86T13 490 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 PELI3Q8N2H9 469 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 OR10T2Q8NGX3 314 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 SMARCD1Q96GM5 515 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 Q96MT0 163 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 FYTTD1Q96QD9 318 aaKnown RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 PSKH2Q96QS6 385 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 UQCC2Q9BRT2 126 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 MMP28Q9H239 520 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 C12orf10Q9HB07 376 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 RNF112Q9ULX5 631 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 CRYL1Q9Y2S2 319 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 PCDHB9Q9Y5E1 797 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 NARSO43776 548 aaKnown RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 NPR3P17342 541 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 GADD45AP24522 165 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 HTR1EP28566 365 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 POLD2P49005 469 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 MAB21L1Q13394 359 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 RAPSNQ13702 412 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 GALNT3Q14435 633 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 SLC8B1Q6J4K2 584 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 PKN3Q6P5Z2 889 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 HDDC2Q7Z4H3 204 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 SPATA19Q7Z5L4 167 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 TMEM135Q86UB9 458 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 LRRC17Q8N6Y2 441 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 IL17RDQ8NFM7 739 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 NARFLQ9H6Q4 476 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 OLA1Q9NTK5 396 aaKnown RBP8.45□□□□□ -1.06
DDB1-217ENST00000540166 PIGVQ9NUD9 493 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 SPATA2Q9UM82 520 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 F9P00740 461 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 SERPINA1P01009 418 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 PDGFBP01127 241 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 SEC13P55735 322 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 PRKCDQ05655 676 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ZNF57Q68EA5 555 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 TIGD7Q6NT04 549 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 FBXO39Q8N4B4 442 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 BEND7Q8N7W2 519 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 FRS2Q8WU20 508 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 PEX13Q92968 403 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 TMEM125Q96AQ2 219 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 FKBP10Q96AY3 582 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 DIRAS2Q96HU8 199 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 TMEM209Q96SK2 561 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 C17orf62Q9BQA9 187 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 GLTPQ9NZD2 209 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 CFAP97Q9P2B7 532 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 MAP10Q9P2G4 905 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 TSR3Q9UJK0 312 aaKnown RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ELOVL7A1L3X0 281 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 TTC24A2A3L6 582 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 LOC730098B7Z3J9 87 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 GPX3P22352 226 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ATP5C1P36542 298 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms