RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 FBXW2Q9UKT8 454 aa7.33□□□□□ -1.24
GNE-205ENST00000539815 RNF112Q9ULX5 631 aa7.33□□□□□ -1.24
GNE-205ENST00000539815 FAM90A27PA6NNH2 459 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 LGALS16A8MUM7 142 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 TXNDC9O14530 226 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 ANKRD34CP0C6C1 535 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 TNNI3P19429 210 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 FDXRP22570 491 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 CMPK1P30085 196 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 RPA3P35244 121 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 CLK3P49761 638 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 WNT3AP56704 352 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 DPCR1Q3MIW9 517 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 CYP4V2Q6ZWL3 525 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 MILR1Q7Z6M3 343 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 NLRP8Q86W28 1048 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 CDKL3Q8IVW4 592 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 RIBC1Q8N443 379 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 C2orf73Q8N5S3 287 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 ACAT2Q9BWD1 397 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 RAB11FIP5Q9BXF6 653 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 SOX17Q9H6I2 414 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 SIAEQ9HAT2 523 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 LZTFL1Q9NQ48 299 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 CASC3O15234 703 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 CRYZL1O95825 349 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 TP53P04637 393 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 ABCB1P08183 1280 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 ZCCHC18P0CG32 403 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 PVRP15151 417 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 ZNF28P17035 718 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 DNASE1P24855 282 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 HPDP32754 393 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 HSD17B2P37059 387 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 EIF2B2P49770 351 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 RCN2Q14257 317 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 AGERQ15109 404 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 TTLL9Q3SXZ7 439 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 PLEKHN1Q494U1 663 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 ARHGAP36Q6ZRI8 547 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 USP43Q70EL4 1123 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 GSTA5Q7RTV2 222 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 SPARTQ8N0X7 666 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 ARHGAP24Q8N264 748 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 BBOF1Q8ND07 529 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 LMO3Q8TAP4 145 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 TCTN2Q96GX1 697 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 APOL2Q9BQE5 337 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 MGME1Q9BQP7 344 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 TRIM54Q9BYV2 358 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 FAM192AQ9GZU8 254 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 SLC25A51Q9H1U9 297 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 THAP1Q9NVV9 213 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 ANK1P16157 1881 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 FAM237AA0A1B0GTK4 181 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 C17orf113A0A1B0GUU1 675 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 HAX1O00165 279 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 AVILO75366 819 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 RPL21P46778 160 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 RPL34P49207 117 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 PDAP1Q13442 181 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 MAMLD1Q13495 774 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 ART3Q13508 389 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 SF3B4Q15427 424 aaKnown RBP eCLIP7.32□□□□□ -1.24
GNE-205ENST00000539815 CHMP1BQ7LBR1 199 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 DEPDC4Q8N2C3 294 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 RAD51AP1Q96B01 352 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 FAM136AQ96C01 138 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 PANX3Q96QZ0 392 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 SECISBP2Q96T21 854 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 AGAP2Q99490 1192 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 VAT1Q99536 393 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 TDRD1Q9BXT4 1180 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 KLHL4Q9C0H6 718 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 ARMC7Q9H6L4 198 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 FARSBQ9NSD9 589 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 DDX18Q9NVP1 670 aaKnown RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 ZNF282Q9UDV7 671 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 FAF1Q9UNN5 650 aaPredicted RBP7.32□□□□□ -1.24
GNE-205ENST00000539815 HIVEP2P31629 2446 aa7.32□□□□□ -1.24
GNE-205ENST00000539815 IGHV5-51A0A0C4DH38 117 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 A0A1W2PNU3 283 aaPredicted RBP7.31□□□□□ -1.24
GNE-205ENST00000539815 TSPAN11A1L157 253 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 C5orf60A6NFR6 353 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 DDX3XO00571 662 aaKnown RBP eCLIP7.31□□□□□ -1.24
GNE-205ENST00000539815 PSMD3O43242 534 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 PRDX3P30048 256 aaKnown RBP7.31□□□□□ -1.24
GNE-205ENST00000539815 PDX1P52945 283 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 FANCCQ00597 558 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 ABRQ12979 859 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 KEAP1Q14145 624 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 CA9Q16790 459 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 C6orf163Q5TEZ5 329 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 METTL11BQ5VVY1 283 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 RFLNAQ6ZTI6 216 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 OTOAQ7RTW8 1153 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 TECPR1Q7Z6L1 1165 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 SIRT6Q8N6T7 355 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 ST6GALNAC3Q8NDV1 305 aa7.31□□□□□ -1.24
GNE-205ENST00000539815 C19orf60Q96EN9 201 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms