RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CMTM7Q96FZ5 175 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 SH3GL1Q99961 368 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 RMND5AQ9H871 391 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 ZDHHC4Q9NPG8 344 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 TBC1D23Q9NUY8 699 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 USE1Q9NZ43 259 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 MAN2B2Q9Y2E5 1009 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 SAMHD1Q9Y3Z3 626 aaKnown RBP13.61□□□□□ -0.23
UBE3B-210ENST00000539599 SNX5Q9Y5X3 404 aa13.61□□□□□ -0.23
UBE3B-210ENST00000539599 TRIM64BA6NI03 449 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 PLK4O00444 970 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 LEFTY1O75610 366 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 MT-ND2P03891 347 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 JUNBP17275 347 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 PSMB9P28065 219 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 TMBIM6P55061 237 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 MC1RQ01726 317 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ABHD18Q0P651 414 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 NPTX1Q15818 432 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 CYP2A13Q16696 494 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF829Q3KNS6 432 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ARSIQ5FYB1 569 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 OR2T5Q6IEZ7 315 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 HTR3DQ70Z44 454 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 OTOP2Q7RTS6 562 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 LRRC70Q7Z2Q7 622 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 THOC6Q86W42 341 aaKnown RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 FAM217AQ8IXS0 508 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 MMP21Q8N119 569 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 CBARPQ8N350 705 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 AADATQ8N5Z0 425 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 PIK3C3Q8NEB9 887 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 OR2A12Q8NGT7 310 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 OR2T29Q8NH02 315 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 NELL1Q92832 810 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 LMLNQ96KR4 655 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 YTHDF1Q9BYJ9 559 aaKnown RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 RAD21L1Q9H4I0 556 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 TMEM45AQ9NWC5 275 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 CCDC88CQ9P219 2028 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 WNT9AO14904 365 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 NDUFS2O75306 463 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 SLC16A8O95907 504 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 LCKP06239 509 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 C8AP07357 584 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 CTSLP07711 333 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 TTKP33981 857 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 MESP2Q0VG99 397 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 NOGQ13253 232 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 VMACQ2NL98 169 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ADPRMQ3LIE5 342 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 COX20Q5RI15 118 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 GPR153Q6NV75 609 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ATG16L2Q8NAA4 619 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF296Q8WUU4 475 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 BORCS5Q969J3 196 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 FAIMQ9NVQ4 179 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ATP11BQ9Y2G3 1177 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 PABPN1LA6NDY0 278 aaKnown RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 CXCL10P02778 98 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 KDELR2P33947 212 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 RAE1P78406 368 aaKnown RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 NTHL1P78549 312 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 GRIN2CQ14957 1233 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 DUOXA1Q1HG43 343 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF385BQ569K4 471 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 CATSPEREQ5SY80 951 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 LYPLAL1Q5VWZ2 237 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 DCDC5Q6ZRR9 648 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 L3MBTL4Q8NA19 623 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 OR5AK3PQ8NH89 298 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 ZFP90Q8TF47 636 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 RAB2BQ8WUD1 216 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 KCNC2Q96PR1 638 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 MCCC1Q96RQ3 725 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 LYSMD1Q96S90 227 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 TUBA1CQ9BQE3 449 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 WRAP53Q9BUR4 548 aaKnown RBP13.6□□□□□ -0.23
UBE3B-210ENST00000539599 SH3BP4Q9P0V3 963 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 SLC6A14Q9UN76 642 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 TESMINQ9Y4I5 508 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 PCDHGA10Q9Y5H3 936 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 GMPPBQ9Y5P6 360 aa13.6□□□□□ -0.23
UBE3B-210ENST00000539599 IGLV3-16A0A075B6K0 115 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 GABRR3A8MPY1 467 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 EVPLLA8MZ36 301 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 PCDH7O60245 1069 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 NUAK1O60285 661 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 CLPXO76031 633 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 RECQL5O94762 991 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-210ENST00000539599 LRG1P02750 347 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 PHEXP78562 749 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 CREMQ03060 361 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 SHQ1Q6PI26 577 aaKnown RBP13.59□□□□□ -0.23
UBE3B-210ENST00000539599 AHSA2Q719I0 299 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 HORMAD1Q86X24 394 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 TMCO5AQ8N6Q1 288 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 TTC29Q8NA56 475 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-210ENST00000539599 GLMNQ92990 594 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms