RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 SAMD11Q96NU1 681 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 TM9SF2Q99805 663 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 UQCC2Q9BRT2 126 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 COPS4Q9BT78 406 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 SPATA9Q9BWV2 254 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CDCA4Q9BXL8 241 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 OR51B5Q9H339 312 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 MFSD1Q9H3U5 465 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 NARFLQ9H6Q4 476 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 RANBP3Q9H6Z4 567 aaPredicted RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 SMURF1Q9HCE7 757 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 FBRSL1Q9HCM7 1045 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 IL1RAPQ9NPH3 570 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CHST12Q9NRB3 414 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 TRMT13Q9NUP7 481 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 PRMT7Q9NVM4 692 aaPredicted RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 SPASTQ9UBP0 616 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 SRP68Q9UHB9 627 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 TEKT2Q9UIF3 430 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 MOSPD1Q9UJG1 213 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 RPS6KA6Q9UK32 745 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ELF5Q9UKW6 265 aaPredicted RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 POLHQ9Y253 713 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 RIPK3Q9Y572 518 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ASB4Q9Y574 426 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 NYNRINQ9P2P1 1898 aaKnown RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 NEMP2A6NFY4 417 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 B4DXG7 233 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ENPP3O14638 875 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 WNT9AO14904 365 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 KERAO60938 352 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CRCPO75575 148 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CREG1O75629 220 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 RFPL3O75679 317 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SLC22A5O76082 557 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CCNDBP1O95273 360 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 FADS2O95864 444 aaKnown RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 IFNA7P01567 189 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 HMGN1P05114 100 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 GAAP10253 952 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 PIPP12273 146 aaPredicted RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 CD1DP15813 335 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 DDX5P17844 614 aaKnown RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 ERCC2P18074 760 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 SAT1P21673 171 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 FDXRP22570 491 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 F8A1P23610 371 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CA5AP35218 305 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ADRA1AP35348 466 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ADRA1BP35368 520 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 AVPR1AP37288 418 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 LIPAP38571 399 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 RGS6P49758 472 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CPT1AP50416 773 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 RORCP51449 518 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CDH8P55286 799 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 MAP3K7CLP57077 242 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 LSM3P62310 102 aaKnown RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 RGS1Q08116 209 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CYP4F3Q08477 520 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ABHD18Q0P651 414 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 TCP10Q12799 353 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 MRPL28Q13084 256 aaKnown RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 CAMK1Q14012 370 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 DGCR6Q14129 220 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 TMEM132DQ14C87 1099 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CARTPTQ16568 116 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 RAB6CQ53S08 254 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 TOR2AQ5JU69 321 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 WIPI1Q5MNZ9 446 aaPredicted RBP6.5□□□□□ -1.37
USP28-207ENST00000538475 HECTD2Q5U5R9 776 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 GARNL3Q5VVW2 1013 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 HACD4Q5VWC8 232 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 NXNL2Q5VZ03 156 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CLEC6AQ6EIG7 209 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 OR2T5Q6IEZ7 315 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CCDC149Q6ZUS6 474 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 AMIGO1Q86WK6 493 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CALHM3Q86XJ0 350 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 MFSD6LQ8IWD5 586 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 FAM126BQ8IXS8 530 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ZZZ3Q8IYH5 903 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CHPFQ8IZ52 775 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 NLGN4XQ8N0W4 816 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 OR8H2Q8N162 312 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CPA6Q8N4T0 437 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 DNAJC22Q8N4W6 341 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 LRRC52Q8N7C0 313 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CLDN22Q8N7P3 220 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 IL17RCQ8NAC3 791 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 OR7G3Q8NG95 312 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 OR56A4Q8NGH8 313 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 OR2T29Q8NH02 315 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 CNIH3Q8TBE1 160 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 PROKR1Q8TCW9 393 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 NETO1Q8TDF5 533 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 ACER1Q8TDN7 264 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 KCTD13Q8WZ19 329 aa6.5□□□□□ -1.37
USP28-207ENST00000538475 FAM162AQ96A26 154 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms