RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SCGB1D1O95968 90 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 DLDP09622 509 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 LAMP2P13473 410 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SERPINF1P36955 418 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 EIF2DP41214 584 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 BCL2L1Q07817 233 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 C2orf80Q0P641 193 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF574Q6ZN55 896 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 BEST4Q8NFU0 473 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SLC5A11Q8WWX8 675 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CNOT9Q92600 299 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ARL5BQ96KC2 179 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 PKP4Q99569 1192 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ATP13A1Q9HD20 1204 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TAS2R10Q9NYW0 307 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 DISP1Q96F81 1524 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SALL3Q9BXA9 1300 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 A0A088AWK7 358 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ARPC5O15511 151 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF208O43345 1280 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 FGF1P05230 155 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CXCR2P25025 360 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CASP3P42574 277 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 RFX5P48382 616 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ATXN1P54253 815 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CYP1B1Q16678 543 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ALG11Q2TAA5 492 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 NUDT18Q6ZVK8 323 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 MMP28Q9H239 520 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 MARCH2Q9P0N8 246 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 NYAP2Q9P242 653 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 EXTL2Q9UBQ6 330 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TMEM98Q9Y2Y6 226 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ANKRD33BA6NCL7 494 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 OR7A17O14581 309 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 KAT7O95251 611 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 HMGN1P05114 100 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZBTB48P10074 688 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TCF7P36402 384 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 DGKQP52824 942 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 FXYD6P3P58550 94 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 RANBP3LQ86VV4 465 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF280BQ86YH2 543 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 OR5T1Q8NG75 326 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TMEM80Q96HE8 168 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 HYLS1Q96M11 299 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 SDCBP2Q9H190 292 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 RIOX1Q9H6W3 641 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ROBO3Q96MS0 1386 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF701M0R085 212 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 RPP14O95059 124 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 RAB36O95755 333 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TSPAN15O95858 294 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TGM6O95932 706 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CDC42EP5Q6NZY7 148 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 C16orf59Q7L2K0 433 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CHERPQ8IWX8 916 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GTPBP8Q8N3Z3 284 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 FTMTQ8N4E7 242 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TTLL6Q8N841 843 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 GDPD1Q8N9F7 314 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 FBXO27Q8NI29 283 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 CSGALNACT1Q8TDX6 532 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 WNT8BQ93098 351 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF641Q96N77 438 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 EIF5A2Q9GZV4 153 aaKnown RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 UNCXA6NJT0 531 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 IQCF5A8MTL0 148 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 ERBB2P04626 1255 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 PET100P0DJ07 73 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 CKMT1AP12532 417 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 MAGEA3P43357 314 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 AP1S1P61966 158 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 RIPPLY1Q0D2K3 151 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 UBXN11Q5T124 520 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 DCAF12L1Q5VU92 463 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 WASH2PQ6VEQ5 465 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 PCSK9Q8NBP7 692 aaKnown RBP5.52□□□□□ -1.53
CSMD1-215ENST00000537824 OR2T35Q8NGX2 323 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF675Q8TD23 568 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 FCAMRQ8WWV6 532 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 OSTF1Q92882 214 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 EXOSC8Q96B26 276 aaKnown RBP5.52□□□□□ -1.53
CSMD1-215ENST00000537824 P2RY11Q96G91 374 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 FAM84AQ96KN4 292 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 TRIM36Q9NQ86 728 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 MOCS1Q9NZB8 636 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 LAMB1P07942 1786 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 XKRYO14609 159 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 STK16O75716 305 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 CDK1P06493 297 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF616Q08AN1 781 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 MSS51Q4VC12 460 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 CELF3Q5SZQ8 465 aaKnown RBP5.52□□□□□ -1.53
CSMD1-215ENST00000537824 NKX2-3Q8TAU0 364 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 DCAKDQ8WVC6 231 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 CGREF1Q99674 301 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 SYT4Q9H2B2 425 aa5.52□□□□□ -1.53
CSMD1-215ENST00000537824 ZBTB20Q9HC78 741 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-215ENST00000537824 ARMC1Q9NVT9 282 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms