RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CMPK1P30085 196 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 DCTP40126 519 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 FOLR3P41439 243 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 RGS4P49798 205 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 PNLIPRP1P54315 467 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 CDKN2DP55273 166 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 GRM7Q14831 915 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 SLC9A5Q14940 896 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 FAM214AQ32MH5 1076 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 TRMT10BQ6PF06 316 aaKnown RBP11.89□□□□□ -0.51
PRKDC-207ENST00000536483 PAQR3Q6TCH7 311 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 SLC26A11Q86WA9 606 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 TMEM151BQ8IW70 566 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 CPNE9Q8IYJ1 553 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 EEF1AKMT1Q8WVE0 214 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 CCDC138Q96M89 665 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 C16orf45Q96MC5 204 aaPredicted RBP11.89□□□□□ -0.51
PRKDC-207ENST00000536483 PLCD4Q9BRC7 762 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 NDC1Q9BTX1 674 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 ILKAPQ9H0C8 392 aaPredicted RBP11.89□□□□□ -0.51
PRKDC-207ENST00000536483 ZBTB20Q9HC78 741 aaPredicted RBP11.89□□□□□ -0.51
PRKDC-207ENST00000536483 SLC22A11Q9NSA0 550 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 P4HTMQ9NXG6 502 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 GRHL1Q9NZI5 618 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 IFT80Q9P2H3 777 aaPredicted RBP11.89□□□□□ -0.51
PRKDC-207ENST00000536483 DHCR7Q9UBM7 475 aaKnown RBP11.89□□□□□ -0.51
PRKDC-207ENST00000536483 NDOR1Q9UHB4 597 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 TRMT6Q9UJA5 497 aaKnown RBP11.89□□□□□ -0.51
PRKDC-207ENST00000536483 CHMP2BQ9UQN3 213 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 SLC5A6Q9Y289 635 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 KLHL20Q9Y2M5 609 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 VWA7Q9Y334 891 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 SNX24Q9Y343 169 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 FER1L5A0AVI2 2057 aa11.89□□□□□ -0.51
PRKDC-207ENST00000536483 CRYBG3Q68DQ2 2970 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 CCDC88CQ9P219 2028 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 A0A1B0GX78 115 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 KRT87PA6NCN2 255 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 ANKUB1A6NFN9 424 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 DSCR3O14972 297 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 RAD51CO43502 376 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 CNOT3O75175 753 aaKnown RBP11.88□□□□□ -0.51
PRKDC-207ENST00000536483 CCNDBP1O95273 360 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 ALPPP05187 535 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 ITGAXP20702 1163 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PSMB5P28074 263 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 IMPA1P29218 277 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 GLRBP48167 497 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 CAV1Q03135 178 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 MGAT5Q09328 741 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PDIA2Q13087 525 aaKnown RBP11.88□□□□□ -0.51
PRKDC-207ENST00000536483 CUL1Q13616 776 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PRTGQ2VWP7 1150 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 NKAIN1Q4KMZ8 207 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 RBM20Q5T481 1227 aaKnown RBP11.88□□□□□ -0.51
PRKDC-207ENST00000536483 ICE2Q659A1 982 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 FAM45BPQ6NSW5 357 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 IGFL3Q6UXB1 125 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 SYT10Q6XYQ8 523 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 UBE2R2Q712K3 238 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PIWIL4Q7Z3Z4 852 aaKnown RBP11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PPP1R32Q7Z5V6 425 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PAQR7Q86WK9 346 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 ZNF655Q8N720 491 aaPredicted RBP11.88□□□□□ -0.51
PRKDC-207ENST00000536483 FBXO36Q8NEA4 188 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 OR2Y1Q8NGV0 311 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 FAM45AQ8TCE6 357 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 MCOLN3Q8TDD5 553 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 FKBP10Q96AY3 582 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PTERQ96BW5 349 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 C5orf34Q96MH7 638 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 MIPEPQ99797 713 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 ZFYVE21Q9BQ24 234 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 SELENOSQ9BQE4 189 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 DPH7Q9BTV6 452 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PARVBQ9HBI1 364 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 IRAK4Q9NWZ3 460 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 NSMCE4AQ9NXX6 385 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 UTP6Q9NYH9 597 aaKnown RBP11.88□□□□□ -0.51
PRKDC-207ENST00000536483 PDE10AQ9Y233 779 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 COPG1Q9Y678 874 aaKnown RBP11.88□□□□□ -0.51
PRKDC-207ENST00000536483 CELSR2Q9HCU4 2923 aa11.88□□□□□ -0.51
PRKDC-207ENST00000536483 KCNE1BA0A087WTH5 132 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 CTIFO43310 598 aaKnown RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 IGHEP01854 428 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 C1QAP02745 245 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 UMODP07911 640 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 GSTA2P09210 222 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 PIM1P11309 404 aaPredicted RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 MCM3P25205 808 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 RPA3P35244 121 aaPredicted RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 AP1S2P56377 157 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 IL2P60568 153 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 YBX1P67809 324 aaKnown RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 CALCOCO2Q13137 446 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 ELOAQ14241 798 aaKnown RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 FASTKD3Q14CZ7 662 aaKnown RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 CRB2Q5IJ48 1285 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 WASHC2DQ5SRD0 308 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 HECTD2Q5U5R9 776 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms