RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 C1QAP02745 245 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 FOLR3P41439 243 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 ABATP80404 500 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 SSPNQ14714 243 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 NKG7Q16617 165 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 FAM214AQ32MH5 1076 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 PRAMEF13Q5VWM6 474 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 SBSNQ6UWP8 590 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 C3orf62Q6ZUJ4 267 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 PPP1R32Q7Z5V6 425 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 MRGPREQ86SM8 312 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 CCDC25Q86WR0 208 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 SHISA5Q8N114 240 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 CSNK1A1LQ8N752 337 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 PTERQ96BW5 349 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 PYCR2Q96C36 320 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 PDLIM5Q96HC4 596 aaKnown RBP13.61□□□□□ -0.23
UBE3B-206ENST00000536398 VPS39Q96JC1 886 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 C17orf62Q9BQA9 187 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 MESP1Q9BRJ9 268 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 UNKQ9C0B0 810 aaKnown RBP13.61□□□□□ -0.23
UBE3B-206ENST00000536398 SOX17Q9H6I2 414 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-206ENST00000536398 CAB39LQ9H9S4 337 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 ARL15Q9NXU5 204 aa13.61□□□□□ -0.23
UBE3B-206ENST00000536398 UTP6Q9NYH9 597 aaKnown RBP13.61□□□□□ -0.23
UBE3B-206ENST00000536398 FEZF1A0PJY2 475 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 NPEPPSL1A6NEC2 478 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 FAM155BO75949 473 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 ZIC2O95409 532 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-206ENST00000536398 HIST1H2AGP0C0S8 130 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-206ENST00000536398 EZRP15311 586 aaKnown RBP13.6□□□□□ -0.23
UBE3B-206ENST00000536398 NPPBP16860 134 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 ZNF37AP17032 561 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-206ENST00000536398 HIST1H2ADP20671 130 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 GMPRP36959 345 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 MAGEA4P43358 317 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 CSNK1G2P78368 415 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 CKAP4Q07065 602 aaKnown RBP13.6□□□□□ -0.23
UBE3B-206ENST00000536398 RAPSNQ13702 412 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 NAA25Q14CX7 972 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 YOD1Q5VVQ6 348 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-206ENST00000536398 TCTN3Q6NUS6 607 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 ASB18Q6ZVZ8 466 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 RAB43Q86YS6 212 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 SPATA6LQ8N4H0 392 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 ARHGEF39Q8N4T4 335 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 COL26A1Q96A83 441 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 CABS1Q96KC9 395 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 HIST1H2AHQ96KK5 128 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 OR4K3Q96R72 315 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 SPSB2Q99619 263 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 HIST1H2AJQ99878 128 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 H2AFJQ9BTM1 129 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 SGPP1Q9BX95 441 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 RAB17Q9H0T7 212 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 RHOJQ9H4E5 214 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 LRRC4CQ9HCJ2 640 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 ZNF304Q9HCX3 659 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 BAHCC1Q9P281 2608 aa13.6□□□□□ -0.23
UBE3B-206ENST00000536398 MRPS2Q9Y399 296 aaKnown RBP13.6□□□□□ -0.23
UBE3B-206ENST00000536398 HEATR5BQ9P2D3 2071 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 FAM159BA6NKW6 160 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 VSTM2BA6NLU5 285 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 J3QKU1 62 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 LCMT2O60294 686 aaKnown RBP13.59□□□□□ -0.23
UBE3B-206ENST00000536398 CDH1P12830 882 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 RELAQ04206 551 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 PPP1R3AQ16821 1122 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 C18orf21Q32NC0 220 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-206ENST00000536398 UBAP2Q5T6F2 1119 aaKnown RBP13.59□□□□□ -0.23
UBE3B-206ENST00000536398 ATG14Q6ZNE5 492 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 VN1R4Q7Z5H5 301 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 PRSS58Q8IYP2 241 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 NOA1Q8NC60 698 aaKnown RBP13.59□□□□□ -0.23
UBE3B-206ENST00000536398 FDCSPQ8NFU4 85 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 OR56A3Q8NH54 315 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 RERGQ96A58 199 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-206ENST00000536398 FKBP10Q96AY3 582 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 FBXL8Q96CD0 374 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 SLC25A23Q9BV35 468 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 SLC26A1Q9H2B4 701 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 ZDHHC18Q9NUE0 388 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 TMEM184CQ9NVA4 438 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 P4HTMQ9NXG6 502 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 SPTA1P02549 2419 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 ANKRD12Q6UB98 2062 aa13.59□□□□□ -0.23
UBE3B-206ENST00000536398 A0A0A6YYC8 382 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 I3L1I5 382 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 PHGDHO43175 533 aaKnown RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 FOXS1O43638 330 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 ALOX12BO75342 701 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 CEACAM4O75871 244 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 WISP3O95389 354 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 ALBP02768 609 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 PIM1P11309 404 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 BCL6P41182 706 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 AP1S2P56377 157 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 MEF2AQ02078 507 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 CAV1Q03135 178 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms