RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 LRRC23Q53EV4 343 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 GRHL2Q6ISB3 625 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 DHRS4L2Q6PKH6 230 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF551Q7Z340 670 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 SYT12Q8IV01 421 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 KLHDC8AQ8IYD2 350 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 TMEM132CQ8N3T6 1108 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 LMNTD1Q8N9Z9 388 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 OR52E4Q8NGH9 312 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 PNPT1Q8TCS8 783 aaKnown RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 C12orf43Q96C57 262 aaKnown RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 C11orf24Q96F05 449 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 TMEM245Q9H330 911 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 SGK2Q9HBY8 427 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 ERVK-11Q9UQG0 969 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 SZT2Q5T011 3432 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 KLHL33A6NCF5 533 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 RFXANKO14593 260 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 HPRP00739 348 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 MYCLP1P12525 358 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 PRPS1L1P21108 318 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 HNF4AP41235 474 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 KIR3DL1P43629 444 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 NRIP1P48552 1158 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF33BQ06732 778 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 MTAPQ13126 283 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 PMS2P3Q13401 168 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 BIRC2Q13490 618 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 BCL7AQ4VC05 210 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 PDE12Q6L8Q7 609 aaKnown RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 FKBP9P1Q75LS8 142 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF547Q8IVP9 402 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 KIAA1958Q8N8K9 716 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF420Q8TAQ5 688 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 NETO1Q8TDF5 533 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF480Q8WV37 535 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 NEIL2Q969S2 332 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 FAM162AQ96A26 154 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 FAM120BQ96EK7 910 aaKnown RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 REXO4Q9GZR2 422 aaKnown RBP12.93□□□□□ -0.34
VPS33B-202ENST00000535906 CXorf21Q9HAI6 301 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 AP3M1Q9Y2T2 418 aa12.93□□□□□ -0.34
VPS33B-202ENST00000535906 FAM220BPB1ANY3 271 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 LZTS3O60299 673 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 CREG1O75629 220 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 PRKD3O94806 890 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 SCELO95171 688 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 THRBP10828 461 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 PCDH1Q08174 1060 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 RAB39AQ14964 217 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 PON2Q15165 354 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 GPR149Q86SP6 731 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 STK32CQ86UX6 486 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 ZDHHC13Q8IUH4 622 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 MMAAQ8IVH4 418 aaKnown RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 CLEC4FQ8N1N0 589 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 OR7G3Q8NG95 312 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 B4GALNT2Q8NHY0 566 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 EZH1Q92800 747 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 RDH12Q96NR8 316 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 MUS81Q96NY9 551 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 DOK1Q99704 481 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 POLR1BQ9H9Y6 1135 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 DCAF13Q9NV06 445 aaKnown RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 THG1LQ9NWX6 298 aaKnown RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 IFT80Q9P2H3 777 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 DNAJB9Q9UBS3 223 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 CDC14AQ9UNH5 594 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 G3V2T6 193 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 SCN2BO60939 215 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 PAPLNO95428 1278 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 DCKP27707 260 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 IST1P53990 364 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 EMP3P54852 163 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 WNT3P56703 355 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 ACSM2AQ08AH3 577 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 EIF4HQ15056 248 aaKnown RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 ZIK1Q3SY52 487 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 ACSM2BQ68CK6 577 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 DOK6Q6PKX4 331 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 KCTD8Q6ZWB6 473 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 TERB1Q8NA31 727 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 HUS1BQ8NHY5 278 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 NCLNQ969V3 563 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 SLC47A1Q96FL8 570 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 SAMD11Q96NU1 681 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 CDH7Q9ULB5 785 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 SH2B3Q9UQQ2 575 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 PCYT1BQ9Y5K3 369 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 HEMK1Q9Y5R4 338 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-202ENST00000535906 PCM1Q15154 2024 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 ATG2AQ2TAZ0 1938 aa12.92□□□□□ -0.34
VPS33B-202ENST00000535906 YY2O15391 372 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 RETP07949 1114 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 ZNF8P17098 575 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 FSHRP23945 695 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 MAPK9P45984 424 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 TBPL1P62380 186 aa12.91□□□□□ -0.34
VPS33B-202ENST00000535906 RAE1P78406 368 aaKnown RBP12.91□□□□□ -0.34
VPS33B-202ENST00000535906 DPTQ07507 201 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms