RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 LCTLQ6UWM7 567 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 SBSNQ6UWP8 590 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 TMEM207Q6UWW9 146 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 C3orf62Q6ZUJ4 267 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 COX15Q7KZN9 410 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 MRGPREQ86SM8 312 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 C17orf64Q86WR6 236 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 MMGT1Q8N4V1 131 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 CSNK1A1LQ8N752 337 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 RERGQ96A58 199 aaPredicted RBP13.18□□□□□ -0.3
TMEM258-203ENST00000535297 FBXL8Q96CD0 374 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 TSPAN17Q96FV3 270 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 OR2A5Q96R48 311 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 RBBP8Q99708 897 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 HAUS8Q9BT25 410 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 LRRC1Q9BTT6 524 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 ATG10Q9H0Y0 220 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 WDR54Q9H977 334 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 TMEM184CQ9NVA4 438 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 NXT1Q9UKK6 140 aaKnown RBP13.18□□□□□ -0.3
TMEM258-203ENST00000535297 CCDC88CQ9P219 2028 aa13.18□□□□□ -0.3
TMEM258-203ENST00000535297 BSNQ9UPA5 3926 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 NUP210LQ5VU65 1888 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 CXorf49A8MYA2 514 aaPredicted RBP13.17□□□□□ -0.3
TMEM258-203ENST00000535297 PIAS1O75925 651 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 C1QAP02745 245 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 PLA2G2AP14555 144 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 OTX2P32243 289 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 RRADP55042 308 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 RPS15AP62244 130 aaKnown RBP13.17□□□□□ -0.3
TMEM258-203ENST00000535297 NAB1Q13506 487 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 ZNF460Q14592 562 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 PPP1R3AQ16821 1122 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 GARNL3Q5VVW2 1013 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 TCTN3Q6NUS6 607 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 MED25Q71SY5 747 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 OVCH1Q7RTY7 1134 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 ADAMTSL2Q86TH1 951 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 TMEM102Q8N9M5 508 aaPredicted RBP13.17□□□□□ -0.3
TMEM258-203ENST00000535297 OR56A3Q8NH54 315 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 PTERQ96BW5 349 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 THAP11Q96EK4 314 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 MVB12AQ96EY5 273 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 CABS1Q96KC9 395 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 C10orf90Q96M02 699 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 GPR22Q99680 433 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 TRIM55Q9BYV6 548 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 FAM129AQ9BZQ8 928 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 ING2Q9H160 280 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 SYNPO2LQ9H987 977 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 LRRC4CQ9HCJ2 640 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 GPAMQ9HCL2 828 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 ACSS2Q9NR19 701 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 TLK1Q9UKI8 766 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 IKZF3Q9UKT9 509 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 RUVBL1Q9Y265 456 aaKnown RBP13.17□□□□□ -0.3
TMEM258-203ENST00000535297 HELZ2Q9BYK8 2649 aaKnown RBP13.17□□□□□ -0.3
TMEM258-203ENST00000535297 MED13Q9UHV7 2174 aa13.17□□□□□ -0.3
TMEM258-203ENST00000535297 NPEPPSL1A6NEC2 478 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 H7BY64 318 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.3
TMEM258-203ENST00000535297 DNAJB5O75953 348 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 WISP3O95389 354 aaPredicted RBP13.16□□□□□ -0.3
TMEM258-203ENST00000535297 MED26O95402 600 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 IGHEP01854 428 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 UMODP07911 640 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 CSNK1G2P78368 415 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 CDKL1Q00532 357 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 GUCY2DQ02846 1103 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 CHAF1BQ13112 559 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 ATP1A4Q13733 1029 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 NKG7Q16617 165 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 CEP128Q6ZU80 1094 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 CEP97Q8IW35 865 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 CTAGE3PQ8IX95 158 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 METTL27Q8N6F8 245 aaPredicted RBP13.16□□□□□ -0.3
TMEM258-203ENST00000535297 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.16□□□□□ -0.3
TMEM258-203ENST00000535297 NACC2Q96BF6 587 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 ALKBH8Q96BT7 664 aaKnown RBP13.16□□□□□ -0.3
TMEM258-203ENST00000535297 PRAP1Q96NZ9 151 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 SPSB2Q99619 263 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 DERL2Q9GZP9 239 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 ZNF304Q9HCX3 659 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 ZNF71Q9NQZ8 489 aaPredicted RBP13.16□□□□□ -0.3
TMEM258-203ENST00000535297 CDC14AQ9UNH5 594 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 SH2B3Q9UQQ2 575 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 TP53TG5Q9Y2B4 290 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 MTO1Q9Y2Z2 717 aaKnown RBP13.16□□□□□ -0.3
TMEM258-203ENST00000535297 PCDHGA9Q9Y5G4 932 aaKnown RBP13.16□□□□□ -0.3
TMEM258-203ENST00000535297 PCSK5Q92824 1860 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 BOD1L1Q8NFC6 3051 aa13.16□□□□□ -0.3
TMEM258-203ENST00000535297 KCNE1BA0A087WTH5 132 aa13.15□□□□□ -0.3
TMEM258-203ENST00000535297 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
TMEM258-203ENST00000535297 CDC7O00311 574 aa13.15□□□□□ -0.3
TMEM258-203ENST00000535297 PEX12O00623 359 aa13.15□□□□□ -0.3
TMEM258-203ENST00000535297 P2RX6O15547 441 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms