RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 GGT5P36269 586 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 SLC1A6P48664 564 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 PRKG2Q13237 762 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 TLR1Q15399 786 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 SULT1C3Q6IMI6 304 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 DHRS4L2Q6PKH6 230 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF554Q86TJ5 538 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 ERI1Q8IV48 349 aaKnown RBP11.89□□□□□ -0.51
SCARB1-204ENST00000535005 TRIM48Q8IWZ4 208 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 SLC35F3Q8IY50 421 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 KLHDC8AQ8IYD2 350 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 HMGCLL1Q8TB92 370 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 SH3KBP1Q96B97 665 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 RHBDF1Q96CC6 855 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 HGH1Q9BTY7 390 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 TWSG1Q9GZX9 223 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 CD274Q9NZQ7 290 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 PTBP2Q9UKA9 531 aaKnown RBP11.89□□□□□ -0.51
SCARB1-204ENST00000535005 EP300Q09472 2414 aaPredicted RBP11.89□□□□□ -0.51
SCARB1-204ENST00000535005 RALGAPA1Q6GYQ0 2036 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 PRAMEF33A0A0G2JMD5 474 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 SUPT3HB4E1H0 165 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 STX16-NPEPL1H3BU86 382 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 STX16O14662 325 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 SUPT3HO75486 399 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 S100BP04271 92 aaPredicted RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 FGF3P11487 239 aaPredicted RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 CDK4P11802 303 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 IDH3AP50213 366 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 INHBCP55103 352 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 MAZP56270 477 aaKnown RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 HHEXQ03014 270 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 SPIDRQ14159 915 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 PCLAFQ15004 111 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 CYP2A13Q16696 494 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 INAVAQ3KP66 663 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 NADK2Q4G0N4 442 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 CES4AQ5XG92 561 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 METTL2BQ6P1Q9 378 aaKnown RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 PRR23CQ6ZRP0 262 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF438Q7Z4V0 828 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 TICAM1Q8IUC6 712 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 SLC22A9Q8IVM8 553 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 FBXO39Q8N4B4 442 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 KYQ8NBH2 561 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 OR52E1Q8NGJ3 308 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 SREK1Q8WXA9 508 aaKnown RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 LRGUKQ96M69 825 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 EBF4Q9BQW3 602 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 RAB11FIP5Q9BXF6 653 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 TMEM9BQ9NQ34 198 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 OXSMQ9NWU1 459 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 NCKIPSDQ9NZQ3 722 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 STOX2Q9P2F5 926 aaPredicted RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 ITGB1BP2Q9UKP3 347 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 TDRKHQ9Y2W6 561 aaKnown RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 FAM221BA6H8Z2 402 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF839A8K0R7 811 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 A8MT66 165 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 TMEM114B3SHH9 223 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 PPM1DO15297 605 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 TAPBPO15533 448 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 SIGLEC6O43699 453 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 NUDT21O43809 227 aaKnown RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 IPO13O94829 963 aaKnown RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 GUCA1CO95843 209 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 SLC16A8O95907 504 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 KITP10721 976 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 THRAP10827 490 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 DMDP11532 3685 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 COX4I1P13073 169 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 GFAPP14136 432 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 IDO1P14902 403 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 IMPA1P29218 277 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 GRK6P43250 576 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 RAB28P51157 221 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 PRKAA2P54646 552 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 DNAJB13P59910 316 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 GPR18Q14330 331 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 HERC3Q15034 1050 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 ZXDCQ2QGD7 858 aaPredicted RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 ANKS6Q68DC2 871 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 AGTRAPQ6RW13 159 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 TMEM26Q6ZUK4 368 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 LRRC56Q8IYG6 542 aaPredicted RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 DEFB107AQ8IZN7 70 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 RAB42Q8N4Z0 105 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 OR6C4Q8NGE1 309 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 OR56A3Q8NH54 315 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 UBTD2Q8WUN7 234 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF480Q8WV37 535 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 EXT2Q93063 718 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 CNDP1Q96KN2 507 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 EGFL8Q99944 293 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 EDEM2Q9BV94 578 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 MARCOQ9UEW3 520 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms