RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CYP2U1Q7Z449 544 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 UBE2Q1Q7Z7E8 422 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 ZSWIM9Q86XI8 627 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 CALHM3Q86XJ0 350 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 PLD3Q8IV08 490 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 GPR26Q8NDV2 337 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 HTRA1Q92743 480 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 MAL2Q969L2 176 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 ZNF486Q96H40 463 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-226ENST00000533820 THG1LQ9NWX6 298 aaKnown RBP18.75■□□□□ 0.59
CAPN1-226ENST00000533820 LRFN2Q9ULH4 789 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 PCM1Q15154 2024 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 CLIC1O00299 241 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 INPPL1O15357 1258 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 PRKCAP17252 672 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 TNFRSF1BP20333 461 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 PSMA3P25788 255 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 HOXD10P28358 340 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 PTPN6P29350 595 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 RYKP34925 604 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 ST13P50502 369 aaKnown RBP18.75■□□□□ 0.59
CAPN1-226ENST00000533820 CLDN8P56748 225 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 CAP1Q01518 475 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 CREMQ03060 361 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 DGUOKQ16854 277 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 INAVAQ3KP66 663 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 ANGPTL8Q6UXH0 198 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 TPGS1Q6ZTW0 290 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 USP7Q93009 1102 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 ASIC4Q96FT7 647 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 NTMT1Q9BV86 223 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 ASPSCR1Q9BZE9 553 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 CLEC4EQ9ULY5 219 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 FPGTO14772 594 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 CD36P16671 472 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 KRT20P35900 424 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 SLC22A16Q86VW1 577 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 VRK3Q8IV63 474 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 PSD4Q8NDX1 1056 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 HSH2DQ96JZ2 352 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 MROQ9BYG7 248 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 TRPS1Q9UHF7 1281 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 SPEF1Q9Y4P9 236 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 RGS10O43665 173 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 CCR7P32248 378 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 KIR3DL1P43629 444 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 NUDT6P53370 316 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 ACLYP53396 1101 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 KIAA1841Q6NSI8 718 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 CCDC71Q8IV32 467 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-226ENST00000533820 SETD9Q8NE22 299 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 KCNC2Q96PR1 638 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 RUBCNLQ9H714 662 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 B3GNT3Q9Y2A9 372 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 NPIPB15A6NHN6 443 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-226ENST00000533820 PRAMEF4O60810 478 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 TRBC1P01850 177 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 C21orf33P30042 268 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-226ENST00000533820 COPZ1P61923 177 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 MVKQ03426 396 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 ABHD18Q0P651 414 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 CYP27C1Q4G0S4 372 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 PRAMEF9Q5VWM5 478 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 NEK5Q6P3R8 708 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 SYT12Q8IV01 421 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 LGALS12Q96DT0 336 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 WDR12Q9GZL7 423 aaKnown RBP18.74■□□□□ 0.59
CAPN1-226ENST00000533820 ZBTB20Q9HC78 741 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-226ENST00000533820 C12orf4Q9NQ89 552 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 TMEM161AQ9NX61 479 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 ANKMY1Q9P2S6 941 aa18.74■□□□□ 0.59
CAPN1-226ENST00000533820 CRNNQ9UBG3 495 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-226ENST00000533820 MANSC4A6NHS7 340 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 M0R129 80 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 UGT2B4P06133 528 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 GALTP07902 379 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 HMGA1P17096 107 aaKnown RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 HOXA9P31269 272 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 CLK1P49759 484 aaKnown RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 RFX4Q33E94 735 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 SOWAHCQ53LP3 525 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 ATAD3BQ5T9A4 648 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 TRAF7Q6Q0C0 670 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 BEND7Q8N7W2 519 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 OR52J3Q8NH60 311 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 ELMO1Q92556 727 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 PROX1Q92786 737 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 CASD1Q96PB1 797 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 SLC32A1Q9H598 525 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 MAGIXQ9H6Y5 334 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 ITM2CQ9NQX7 267 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 DNMT3BQ9UBC3 853 aaKnown RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 SAMD4AQ9UPU9 718 aaKnown RBP18.73■□□□□ 0.59
CAPN1-226ENST00000533820 SLC22A1O15245 554 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 OPN1SWP03999 348 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 FABP3P05413 133 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 CYP4F2P78329 520 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 ATP13A5Q4VNC0 1218 aa18.73■□□□□ 0.59
CAPN1-226ENST00000533820 NXPE1Q8N323 547 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms