RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 EFCAB7A8K855 629 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 HMGB1P1B2RPK0 211 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 PLD2O14939 933 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 RGS16O15492 202 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 HCRTR1O43613 425 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 GLRA3O75311 464 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 MSL3P1P0C860 447 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 ITIH1P19827 911 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 CMPK1P30085 196 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 HSPA7P48741 367 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 AGTR2P50052 363 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 TSTA3Q13630 321 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 KCNAB1Q14722 419 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 SETDB1Q15047 1291 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 C3orf38Q5JPI3 329 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 EXOC3L1Q86VI1 746 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 THOC6Q86W42 341 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 PAQR7Q86WK9 346 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 FAM81AQ8TBF8 368 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 ZUFSPQ96AP4 578 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 TCTN2Q96GX1 697 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 TSNARE1Q96NA8 513 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 CD244Q9BZW8 370 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 POLR1BQ9H9Y6 1135 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 MRPS30Q9NP92 439 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 CUEDC1Q9NWM3 386 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 SLC22A14Q9Y267 594 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 TRABD2BA6NFA1 517 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 PDLIM1O00151 329 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 IPO13O94829 963 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 PROCP04070 461 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 EBLN1P0CF75 366 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 EPORP19235 508 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 ALDH18A1P54886 795 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 SRRM1Q8IYB3 904 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 ARFGAP2Q8N6H7 521 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 CCT6BQ92526 530 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 PMEPA1Q969W9 287 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 ALKBH8Q96BT7 664 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 HAUS8Q9BT25 410 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 DPH7Q9BTV6 452 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 C12orf65Q9H3J6 166 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 SYNPO2LQ9H987 977 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 FBXO8Q9NRD0 319 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 ABCF3Q9NUQ8 709 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 WWOXQ9NZC7 414 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 ANKMY1Q9P2S6 941 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 PILRAQ9UKJ1 303 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 PCDHGA4Q9Y5G9 962 aa12.22□□□□□ -0.45
RPUSD4-208ENST00000533628 H3BMH7 237 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 TYROBPO43914 113 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 PLIN3O60664 434 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 PRAMEF4O60810 478 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 CTSVO60911 334 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 STK16O75716 305 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 CCNDBP1O95273 360 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 S100BP04271 92 aaPredicted RBP12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 PCBP2Q15366 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 PFKFB4Q16877 469 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 PRAMEF9Q5VWM5 478 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 FBXO42Q6P3S6 717 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 ABHD11Q8NFV4 315 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 APOPT1Q96IL0 206 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 ATP6V1G3Q96LB4 118 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 ANKRD27Q96NW4 1050 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 TSC22D3Q99576 134 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 TMBIM4Q9HC24 238 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 APMAPQ9HDC9 416 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 PDE7BQ9NP56 450 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 AKAP7Q9P0M2 348 aaPredicted RBP12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 BAIAP2L1Q9UHR4 511 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 GRID1Q9ULK0 1009 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 TMCO1Q9UM00 188 aa12.21□□□□□ -0.45
RPUSD4-208ENST00000533628 GMNCA6NCL1 334 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 LRRC14BA6NHZ5 514 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 G3V2L1 256 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 STX16-NPEPL1H3BU86 382 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 COPEO14579 308 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 STX16O14662 325 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 DLX3O60479 287 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 DXOO77932 396 aaKnown RBP12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 WDR47O94967 919 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 GABREP78334 506 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 CSNK1G2P78368 415 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 RELAQ04206 551 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 RNF44Q7L0R7 432 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 C17orf64Q86WR6 236 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 CACNA2D3Q8IZS8 1091 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 PTGR2Q8N8N7 351 aaPredicted RBP12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 NEIL2Q969S2 332 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 SLC46A1Q96NT5 459 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 ASCL3Q9NQ33 180 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 ENAMQ9NRM1 1142 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 TMEM184CQ9NVA4 438 aa12.2□□□□□ -0.46
RPUSD4-208ENST00000533628 SOHLH2Q9NX45 425 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms