RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CXXC4Q9H2H0 198 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 STMN3Q9NZ72 180 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 TRPC4Q9UBN4 977 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ZC3H7BQ9UGR2 993 aaKnown RBP11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ALG6Q9Y672 507 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 PRSS21Q9Y6M0 314 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 ABCA2Q9BZC7 2435 aa11.8□□□□□ -0.52
CAPN1-223ENST00000533079 FAM227AF5H4B4 570 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 H7C0C1 242 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 PRRG2O14669 202 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 VPS26AO75436 327 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 SNRNP200O75643 2136 aaKnown RBP11.79□□□□□ -0.52
CAPN1-223ENST00000533079 MED26O95402 600 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 FTCDO95954 541 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 CELA2AP08217 269 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 ANXA5P08758 320 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 PRSS56P0CW18 603 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 PSMA3P25788 255 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 SLC26A3P40879 764 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 ATP5OP48047 213 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 GRB7Q14451 532 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 GLE1Q53GS7 698 aaKnown RBP11.79□□□□□ -0.52
CAPN1-223ENST00000533079 ANKRD20A2Q5SQ80 823 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 ANKRD20A1Q5TYW2 823 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 ANKRD20A3Q5VUR7 823 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 GARNL3Q5VVW2 1013 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 PLAG1Q6DJT9 500 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 MYO7BQ6PIF6 2116 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 BBS12Q6ZW61 710 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 TAX1BP1Q86VP1 789 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 MMP21Q8N119 569 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 DTWD1Q8N5C7 304 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 HORMAD2Q8N7B1 307 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 LRRN4CLQ8ND94 238 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 MDS2Q8NDY4 140 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 OR2L3Q8NG85 312 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 SCMH1Q96GD3 660 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 CABS1Q96KC9 395 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 IMMP1LQ96LU5 166 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 DMRTA2Q96SC8 542 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 FOXC2Q99958 501 aa11.79□□□□□ -0.52
CAPN1-223ENST00000533079 C19orf25Q9UFG5 118 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-223ENST00000533079 ZNF469Q96JG9 3925 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-223ENST00000533079 OR2A25A4D2G3 310 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 GPC4O75487 556 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 APOA4P06727 396 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 C8orf89P0DMQ9 161 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 DRD2P14416 443 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 CD46P15529 392 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 H2AFXP16104 143 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-223ENST00000533079 COMTP21964 271 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 CTNNA2P26232 953 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 FOXN2P32314 431 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 TUBA3CQ13748 450 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 PRTGQ2VWP7 1150 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 H3F3CQ6NXT2 135 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 TUBA3EQ6PEY2 450 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 CCDC50Q8IVM0 306 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 SIAH3Q8IW03 269 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 RCOR2Q8IZ40 523 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 UBL4BQ8N7F7 174 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 AMER3Q8N944 861 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 SPATA4Q8NEY3 305 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 ASB5Q8WWX0 329 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 METTL21AQ8WXB1 218 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 RAD51AP1Q96B01 352 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 SDCCAG3Q96C92 435 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 SPATA13Q96N96 652 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 IL17FQ96PD4 163 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 TRIM51Q9BSJ1 452 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 KCNN3Q9UGI6 736 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 RAB21Q9UL25 225 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 PPT2Q9UMR5 302 aa11.78□□□□□ -0.52
CAPN1-223ENST00000533079 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.78□□□□□ -0.52
CAPN1-223ENST00000533079 PCNX1Q96RV3 2341 aa11.77□□□□□ -0.52
CAPN1-223ENST00000533079 LOC105369274A0A096LPK9 316 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 LOC102723532A0A0G2JNH3 316 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 A0A0J9YVX5 310 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 TXNDC9O14530 226 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 ASNA1O43681 348 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 SUN1O94901 812 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 EIF2S1P05198 315 aaKnown RBP11.77□□□□□ -0.53
CAPN1-223ENST00000533079 CCR7P32248 378 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 PPARGP37231 505 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-223ENST00000533079 PPP2R2AP63151 447 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 SRSF11Q05519 484 aaKnown RBP11.77□□□□□ -0.53
CAPN1-223ENST00000533079 HSPA14Q0VDF9 509 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 TMED2Q15363 201 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 MEP1AQ16819 746 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 ACER2Q5QJU3 275 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 CCDC181Q5TID7 509 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 NAPRTQ6XQN6 538 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 TMEM200AQ86VY9 491 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 DOLPP1Q86YN1 238 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 TGIF2LYQ8IUE0 185 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 OR4N4Q8N0Y3 316 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 LGI4Q8N135 537 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 BEST3Q8N1M1 668 aa11.77□□□□□ -0.53
CAPN1-223ENST00000533079 C2orf73Q8N5S3 287 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-223ENST00000533079 NAP1L3Q99457 506 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms