RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.93■□□□□ 0.78
CHKA-206ENST00000531341 PPP1R21Q6ZMI0 780 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 LANCL3Q6ZV70 420 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 SPNS2Q8IVW8 549 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 CCDC170Q8IYT3 715 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 RAB42Q8N4Z0 105 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 ATG4AQ8WYN0 398 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 MVB12AQ96EY5 273 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 GPR137Q96N19 417 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 NPAS2Q99743 824 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 TUBB6Q9BUF5 446 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 LACRTQ9GZZ8 138 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 ANKRD10Q9NXR5 420 aa19.93■□□□□ 0.78
CHKA-206ENST00000531341 REXO2Q9Y3B8 237 aaKnown RBP19.93■□□□□ 0.78
CHKA-206ENST00000531341 MAN1A2O60476 641 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 STATHP02808 62 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 C8orf89P0DMQ9 161 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 ICAM2P13598 275 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 ETS1P14921 441 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 SMSP52788 366 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 CASP6P55212 293 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 CTSL3PQ5NE16 218 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 Q6ZPB1 254 aaPredicted RBP19.92■□□□□ 0.78
CHKA-206ENST00000531341 OTOAQ7RTW8 1153 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 SPPL2CQ8IUH8 684 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 BEST3Q8N1M1 668 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 GSDMBQ8TAX9 411 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 MRPS30Q9NP92 439 aaKnown RBP19.92■□□□□ 0.78
CHKA-206ENST00000531341 KLHL1Q9NR64 748 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 SPATA7Q9P0W8 599 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 GALPQ9UBC7 116 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 ANAPC5Q9UJX4 755 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 MEMO1Q9Y316 297 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 ITPR3Q14573 2671 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 MTORP42345 2549 aa19.92■□□□□ 0.78
CHKA-206ENST00000531341 GOLGA6L9A6NEM1 432 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 PRPF4O43172 522 aaKnown RBP eCLIP19.91■□□□□ 0.783e-12■■■■■ 34.6
CHKA-206ENST00000531341 VPS26AO75436 327 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 MATN4O95460 622 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 PTMAP06454 111 aaKnown RBP19.91■□□□□ 0.78
CHKA-206ENST00000531341 ANXA5P08758 320 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 ERGP11308 486 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 PPARGP37231 505 aaPredicted RBP19.91■□□□□ 0.78
CHKA-206ENST00000531341 CCNFP41002 786 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 TUBA3CQ13748 450 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 ACER2Q5QJU3 275 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 ZNF425Q6IV72 752 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 TUBA3EQ6PEY2 450 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 SPNS3Q6ZMD2 512 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 PLD3Q8IV08 490 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 MDS2Q8NDY4 140 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 THAP3Q8WTV1 239 aaPredicted RBP19.91■□□□□ 0.78
CHKA-206ENST00000531341 FAM136AQ96C01 138 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 PANX3Q96QZ0 392 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 CYTH2Q99418 400 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 VN1R1Q9GZP7 353 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 GNPTGQ9UJJ9 305 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 ZNF469Q96JG9 3925 aaPredicted RBP19.91■□□□□ 0.78
CHKA-206ENST00000531341 MED13LQ71F56 2210 aa19.91■□□□□ 0.78
CHKA-206ENST00000531341 SOWAHDA6NJG2 315 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 NPIPA5E9PKD4 350 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 GAS8O95995 478 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 CD96P40200 585 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 TTPAP49638 278 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 CRADDP78560 199 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 LONRF1Q17RB8 773 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 BTBD16Q32M84 506 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 AARS2Q5JTZ9 985 aaKnown RBP19.9■□□□□ 0.78
CHKA-206ENST00000531341 GARNL3Q5VVW2 1013 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 SPINK14Q6IE38 97 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 H3F3CQ6NXT2 135 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 PRSS41Q7RTY9 318 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 CDH24Q86UP0 819 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 CEP97Q8IW35 865 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 RNF214Q8ND24 703 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 PPFIBP2Q8ND30 876 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 OR9A1PQ8NGU1 263 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 C14orf79Q96F83 325 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 MAGED4Q96JG8 741 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 BIRC8Q96P09 236 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 DRC3Q9H069 523 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 TAC3Q9UHF0 121 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 NPIPA1Q9UND3 350 aa19.9■□□□□ 0.78
CHKA-206ENST00000531341 ERI2A8K979 691 aaKnown RBP19.89■□□□□ 0.77
CHKA-206ENST00000531341 ARHGEF33A8MVX0 844 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 NIPSNAP2O75323 286 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 MYBL2P10244 700 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 RPA3P35244 121 aaPredicted RBP19.89■□□□□ 0.77
CHKA-206ENST00000531341 CYLC1P35663 651 aaPredicted RBP19.89■□□□□ 0.77
CHKA-206ENST00000531341 EIF3BP55884 814 aaKnown RBP19.89■□□□□ 0.77
CHKA-206ENST00000531341 HSF1Q00613 529 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 TLE4Q04727 773 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 TSTA3Q13630 321 aaPredicted RBP19.89■□□□□ 0.77
CHKA-206ENST00000531341 GBX1Q14549 363 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 C3P1Q6ZMU1 363 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 CPEB2Q7Z5Q1 589 aaKnown RBP19.89■□□□□ 0.77
CHKA-206ENST00000531341 CRLF3Q8IUI8 442 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 CHERPQ8IWX8 916 aaKnown RBP19.89■□□□□ 0.77
CHKA-206ENST00000531341 OR9A4Q8NGU2 314 aa19.89■□□□□ 0.77
CHKA-206ENST00000531341 MAGEC3Q8TD91 643 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms