RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 RIMKLBQ9ULI2 386 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 COLQQ9Y215 455 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-229ENST00000531014 ATG4BQ9Y4P1 393 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 RGPD8O14715 1765 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-229ENST00000531014 C17orf113A0A1B0GUU1 675 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 CYB561D2O14569 222 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 CDRT1O95170 752 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 GADD45GO95257 159 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 CKBP12277 381 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 HNRNPLP14866 589 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTNND1-229ENST00000531014 GNAZP19086 355 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 ICAM3P32942 547 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 MASP1P48740 699 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 PRKXP51817 358 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 TKTL1P51854 596 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 AQP4P55087 323 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 CDH15P55291 814 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 NTRK2Q16620 822 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 ELP2Q6IA86 826 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 KCNT2Q6UVM3 1135 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 COX15Q7KZN9 410 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 CLNKQ7Z7G1 428 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 CUZD1Q86UP6 607 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 RGL4Q8IZJ4 473 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 SPATA6LQ8N4H0 392 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 GOLM1Q8NBJ4 401 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 SUN3Q8TAQ9 357 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 SPATA20Q8TB22 786 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 SLC44A1Q8WWI5 657 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 LINGO1Q96FE5 620 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 BARD1Q99728 777 aaKnown RBP7.07□□□□□ -1.28
CTNND1-229ENST00000531014 OMDQ99983 421 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 TGIF2Q9GZN2 237 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 CDT1Q9H211 546 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 ADAM7Q9H2U9 754 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 EBF3Q9H4W6 596 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 ALG2Q9H553 416 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 REEP4Q9H6H4 257 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 PXMP2Q9NR77 195 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 COQ3Q9NZJ6 369 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 MGAT4CQ9UBM8 478 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 DNAJB9Q9UBS3 223 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 DNPEPQ9ULA0 475 aa7.07□□□□□ -1.28
CTNND1-229ENST00000531014 A0A0G2JN53 185 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 FAM230AA0A1W2PPH8 454 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 TRAPPC13A5PLN9 417 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 C22orf31O95567 290 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 SBK2P0C263 348 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF132P52740 706 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 EEF1A1P68104 462 aaKnown RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ADGRE1Q14246 886 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 NADK2Q4G0N4 442 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 EEF1A1P5Q5VTE0 462 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 MLIPQ5VWP3 458 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 DPY19L4Q7Z388 723 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 FAM160A2Q8N612 972 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ZMIZ2Q8NF64 920 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 GLYATL2Q8WU03 294 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 TMEM176AQ96HP8 235 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 PPP1R16AQ96I34 528 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 DHX33Q9H6R0 707 aaKnown RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 EQTNQ9NQ60 294 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ASAH2Q9NR71 780 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 PCDHGC3Q9UN70 934 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 TESMINQ9Y4I5 508 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 PCDHB5Q9Y5E4 795 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 HTR3EA5X5Y0 456 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 B3GAT3O94766 335 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 SNAPINO95295 136 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 MATN4O95460 622 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 CSF2P04141 144 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 CDK1P06493 297 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ITGA5P08648 1049 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 SMIM10L2AP0DMW4 78 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 SMIM10L2BP0DMW5 78 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 TSPAN8P19075 237 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ART1P52961 327 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 AMHR2Q16671 573 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 XKR4Q5GH76 650 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ARL9Q6T311 187 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF367Q7RTV3 350 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF571Q7Z3V5 609 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 TFAP2DQ7Z6R9 452 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 UEVLDQ8IX04 471 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 MCOLN2Q8IZK6 566 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ANKRD52Q8NB46 1076 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 FCAMRQ8WWV6 532 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 C8orf48Q96LL4 319 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 TSSK3Q96PN8 268 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 SH2D3AQ9BRG2 576 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 MRPL45Q9BRJ2 306 aaKnown RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 USP29Q9HBJ7 922 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 ZFP57Q9NU63 452 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 SPATA6Q9NWH7 488 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 DNMT3LQ9UJW3 386 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 A0A0U1RQK1 487 aa7.06□□□□□ -1.28
CTNND1-229ENST00000531014 CACNB4O00305 520 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 EIF1AYO14602 144 aaKnown RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 MAGEB4O15481 346 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-229ENST00000531014 SRPRAP08240 638 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms