RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 UPK3BL2E5RIL1 263 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 HOXC11O43248 304 aaPredicted RBP11.21□□□□□ -0.61
USP35-207ENST00000530546 CRYZL1O95825 349 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 CRHBPP24387 322 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 CD40LGP29965 261 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 PBLDP30039 288 aaPredicted RBP11.21□□□□□ -0.61
USP35-207ENST00000530546 DGKGP49619 791 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 PPP5CP53041 499 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 METAP1P53582 386 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 PLCL1Q15111 1095 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 CYP51A1Q16850 503 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 PTCHD3Q3KNS1 767 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 COQ5Q5HYK3 327 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 PRSS36Q5K4E3 855 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 TMC5Q6UXY8 1006 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 TSPEARQ8WU66 669 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 PHF10Q8WUB8 498 aaKnown RBP11.21□□□□□ -0.61
USP35-207ENST00000530546 SNX18Q96RF0 628 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 P2RY13Q9BPV8 354 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 ING2Q9H160 280 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 CERS4Q9HA82 394 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 LRTM1Q9HBL6 345 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 NECTIN3Q9NQS3 549 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 IL36AQ9UHA7 158 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 CCL27Q9Y4X3 112 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 SCN8AQ9UQD0 1980 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 FADS2P1A8MWK0 482 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 EVPLLA8MZ36 301 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 CLDN9O95484 217 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 EBLN1P0CF75 366 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 CBSLP0DN79 551 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 CDH1P12830 882 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 HLA-EP13747 358 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 CBSP35520 551 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 GNG2P59768 71 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 COPZ1P61923 177 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 TUBA1BP68363 451 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 DMC1Q14565 340 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 GRIN2CQ14957 1233 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 ACOX1Q15067 660 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 HIST2H2ACQ16777 129 aaPredicted RBP11.21□□□□□ -0.62
USP35-207ENST00000530546 TUBA1AQ71U36 451 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 ADGRG5Q8IZF4 528 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 LILRA3Q8N6C8 439 aaPredicted RBP11.21□□□□□ -0.62
USP35-207ENST00000530546 MAGEE2Q8TD90 523 aaPredicted RBP11.21□□□□□ -0.62
USP35-207ENST00000530546 SELENOMQ8WWX9 145 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.62
USP35-207ENST00000530546 ZBTB18Q99592 522 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 C19orf43Q9BQ61 176 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 DPY30Q9C005 99 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 MUC13Q9H3R2 512 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 SLC32A1Q9H598 525 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 RDH14Q9HBH5 336 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 ANKHQ9HCJ1 492 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 ZDHHC4Q9NPG8 344 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 HPS4Q9NQG7 708 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 BAG5Q9UL15 447 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 SLC22A14Q9Y267 594 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 UGT2A1Q9Y4X1 527 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 CDH23Q9H251 3354 aa11.21□□□□□ -0.62
USP35-207ENST00000530546 MN1Q10571 1320 aaPredicted RBP11.2□□□□□ -0.62
USP35-207ENST00000530546 C5orf42Q9H799 3197 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 IGLV3-16A0A075B6K0 115 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 WASH3PC4AMC7 463 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 SLC28A1O00337 649 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 SNAP29O95721 258 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 PDYNP01213 254 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 CYP17A1P05093 508 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ABCB1P08183 1280 aaPredicted RBP11.2□□□□□ -0.62
USP35-207ENST00000530546 EPORP19235 508 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ITIH1P19827 911 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 HTR1BP28222 390 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ELK4P28324 431 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 GNPDA1P46926 289 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 PREPP48147 710 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 NKX2-5P52952 324 aaPredicted RBP11.2□□□□□ -0.62
USP35-207ENST00000530546 OR4D2P58180 307 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 FOXM1Q08050 763 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 FAM174BQ3ZCQ3 159 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 FAAH2Q6GMR7 532 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 RFPL4BQ6ZWI9 263 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 SNX29P2Q8IUI4 249 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 C7orf61Q8IZ16 206 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 RNF175Q8N4F7 328 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ASCC1Q8N9N2 400 aaKnown RBP11.2□□□□□ -0.62
USP35-207ENST00000530546 OR7A2PQ8NGA2 310 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ATL1Q8WXF7 558 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 RSPRY1Q96DX4 576 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 SEPHS2Q99611 448 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 SAGE2PA6NJ88 616 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 A6NL46 340 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 M0R3G1 203 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 PLK4O00444 970 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 MAN1A2O60476 641 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 GABARAPO95166 117 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 KRT8P05787 483 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ADH5P11766 374 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 PRKCAP17252 672 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 CASP3P42574 277 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms