RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 DDX50Q9BQ39 737 aaKnown RBP5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 CCDC3Q9BQI4 270 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 SLC39A8Q9C0K1 460 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 RIMS4Q9H426 269 aaPredicted RBP5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 GAREM1Q9H706 876 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 FAM118AQ9NWS6 357 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 POU2F3Q9UKI9 436 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 TSPAN16Q9UKR8 245 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 SLC7A7Q9UM01 511 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 FOXA2Q9Y261 457 aaPredicted RBP5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 ZNF510Q9Y2H8 683 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 CLCA3PQ9Y6N3 262 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 PFASO15067 1338 aa5.92□□□□□ -1.46
CAPRIN1-208ENST00000530008 ANKRD61A6NGH8 418 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 ANKDD1BA6NHY2 528 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 NDC80O14777 642 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 HSF2BPO75031 334 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 SOCS5O75159 536 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 PAPSS2O95340 614 aaPredicted RBP5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 GHRP10912 638 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 AREGP15514 252 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 RPA1P27694 616 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 CCKBRP32239 447 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 NR4A2P43354 598 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 GLIPR1P48060 266 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 B3GALT5-AS1P59052 145 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 GMFBP60983 142 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 CETN1Q12798 172 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 ZBTB17Q13105 803 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 TSTA3Q13630 321 aaPredicted RBP5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 INAQ16352 499 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 ACKR1Q16570 336 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 ZNF260Q3ZCT1 412 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 C12orf60Q5U649 245 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 FUT10Q6P4F1 479 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 ZNF554Q86TJ5 538 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 RTN4RL2Q86UN3 420 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 LAX1Q8IWV1 398 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 OLIG1Q8TAK6 271 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 KCNK16Q96T55 309 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 FAM213AQ9BRX8 229 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 URM1Q9BTM9 101 aaKnown RBP5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 POLR3CQ9BUI4 534 aaPredicted RBP5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 NYXQ9GZU5 481 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 SDCBP2Q9H190 292 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 CARD9Q9H257 536 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 UBQLN2Q9UHD9 624 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 STUB1Q9UNE7 303 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 TAF1P21675 1872 aa5.91□□□□□ -1.46
CAPRIN1-208ENST00000530008 A0A1W2PPI3 338 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 MAGEB16A2A368 324 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 K7EPI3 171 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 SYNGR3O43761 229 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 BAG3O95817 575 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 MT-ATP6P00846 226 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 TGFAP01135 160 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 FCGR1AP12314 374 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 FERP16591 822 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 UGT1A6P19224 532 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 CDH3P22223 829 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 DGKAP23743 735 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 ELAVL4P26378 380 aaKnown RBP5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 FUT6P51993 359 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 KIR2DS3Q14952 304 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 SF3B4Q15427 424 aaKnown RBP eCLIP5.9□□□□□ -1.465e-10■□□□□ 8.2
CAPRIN1-208ENST00000530008 ZNF425Q6IV72 752 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 KLHL10Q6JEL2 608 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 TTC27Q6P3X3 843 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 CTR9Q6PD62 1173 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 SYCE2Q6PIF2 218 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 RBM43Q6ZSC3 357 aaKnown RBP5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 LMNTD1Q8N9Z9 388 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 LNX1Q8TBB1 728 aaPredicted RBP5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 SAP25Q8TEE9 199 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 PHLDA1Q8WV24 401 aaPredicted RBP5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 HSD17B8Q92506 261 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 PHF21BQ96EK2 531 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 ZNF577Q9BSK1 485 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 C10orf88Q9H8K7 445 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 FKRPQ9H9S5 495 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 LRRC4Q9HBW1 653 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 KCNMB3Q9NPA1 279 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 ZCCHC3Q9NUD5 404 aaKnown RBP5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 MALT1Q9UDY8 824 aa5.9□□□□□ -1.46
CAPRIN1-208ENST00000530008 ARID1BQ8NFD5 2236 aaPredicted RBP5.9□□□□□ -1.47
CAPRIN1-208ENST00000530008 TRAV18A0A075B6X5 111 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 TMEM129A0AVI4 362 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 CFAP73A6NFT4 308 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 C2orf81A6NN90 581 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 CCL24O00175 119 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 RASGRF2O14827 1237 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 SCO2O43819 266 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 ACSL4O60488 711 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 SMPD2O60906 423 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 CTSVO60911 334 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 CPA3P15088 417 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 ARF4P18085 180 aaPredicted RBP5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 ACP1P24666 158 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 EPHA2P29317 976 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms