RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CYLC2Q14093 348 aaPredicted RBP13.89□□□□□ -0.19
TTC39A-216ENST00000530004 DOC2AQ14183 400 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 KRT33BQ14525 404 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 ARHGAP19Q14CB8 494 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 HERC3Q15034 1050 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 IMPG1Q17R60 797 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 AASDHQ4L235 1098 aaPredicted RBP13.89□□□□□ -0.19
TTC39A-216ENST00000530004 AGKQ53H12 422 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 C6orf136Q5SQH8 315 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 THEMIS2Q5TEJ8 643 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 OGFOD3Q6PK18 319 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 DBX2Q6ZNG2 339 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 TRIM46Q7Z4K8 759 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 TMPRSS11BQ86T26 416 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 C2orf73Q8N5S3 287 aaPredicted RBP13.89□□□□□ -0.19
TTC39A-216ENST00000530004 FNDC5Q8NAU1 212 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 RP9Q8TA86 221 aaKnown RBP13.89□□□□□ -0.19
TTC39A-216ENST00000530004 HMGCLL1Q8TB92 370 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 PATE1Q8WXA2 126 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 NEIL2Q969S2 332 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 MENTQ9BUN1 341 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 DUSP23Q9BVJ7 150 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 TMEM9BQ9NQ34 198 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 SPATA7Q9P0W8 599 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 PCDHGB2Q9Y5G2 931 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 CABIN1Q9Y6J0 2220 aa13.89□□□□□ -0.19
TTC39A-216ENST00000530004 TDRD6O60522 2096 aaKnown RBP13.89□□□□□ -0.19
TTC39A-216ENST00000530004 TRBV23OR9-2A0A075B6M9 112 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 KIR2DS5A0A0G2JLQ3 304 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 A0A0G2JNG1 304 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 KIR2DS3K7RE56 304 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 NOBOXO60393 691 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 ALPPL2P10696 532 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 SLC2A4P14672 509 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 IDO1P14902 403 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 GPX3P22352 226 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 CCND1P24385 295 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 NEK2P51955 445 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 DIO3P55073 304 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 NME5P56597 212 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 PCDH1Q08174 1060 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 CUL3Q13618 768 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 KIR2DS5Q14953 304 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 SUZ12Q15022 739 aaKnown RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 RPS6KA2Q15349 733 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 RPE65Q16518 533 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 CYP2A13Q16696 494 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 GSTA3Q16772 222 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 AP5B1Q2VPB7 878 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 PRAMEF13Q5VWM6 474 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 FRG2Q64ET8 278 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 PAOXQ6QHF9 649 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 GK5Q6ZS86 529 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 MIER2Q8N344 545 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 OR4C6Q8NH72 309 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 UTP4Q969X6 686 aaKnown RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 PPP3R2Q96LZ3 170 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 RAB3IPQ96QF0 476 aaPredicted RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 FRG2BQ96QU4 278 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 NRTNQ99748 197 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 C1orf50Q9BV19 199 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 CADM1Q9BY67 442 aaKnown RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 AIG1Q9NVV5 245 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 CCDC167Q9P0B6 97 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 ZNF624Q9P2J8 865 aaPredicted RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 SH2B3Q9UQQ2 575 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 ZNF839A8K0R7 811 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 TRIM38O00635 465 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 GSC2O15499 205 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 MTHFD1P11586 935 aaKnown RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 XRCC1P18887 633 aaPredicted RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 VARSP26640 1264 aaKnown RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 HNF4AP41235 474 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 SLC19A1P41440 591 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 SLC14A1Q13336 389 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 GRHL2Q6ISB3 625 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 SLCO4C1Q6ZQN7 724 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 C17orf82Q86X59 251 aaPredicted RBP13.88□□□□□ -0.19
TTC39A-216ENST00000530004 RAB42Q8N4Z0 105 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 GPR156Q8NFN8 814 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 OR9I1Q8NGQ6 314 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 SLC37A2Q8TED4 501 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 SLC5A11Q8WWX8 675 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 CAMK1GQ96NX5 476 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 RTKNQ9BST9 563 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 C1orf21Q9H246 121 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 MVB12BQ9H7P6 319 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 GPR45Q9Y5Y3 372 aa13.88□□□□□ -0.19
TTC39A-216ENST00000530004 RALGAPA1Q6GYQ0 2036 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 CPOXP36551 454 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 CASP2P42575 452 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 IRX1P78414 480 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-216ENST00000530004 SLC25A3Q00325 362 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 EMX2Q04743 252 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 MAPRE2Q15555 327 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 DNAL1Q4LDG9 190 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 RFTN2Q52LD8 501 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-216ENST00000530004 CATSPEREQ5SY80 951 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 ZCCHC8Q6NZY4 707 aaKnown RBP13.87□□□□□ -0.19
TTC39A-216ENST00000530004 LCTLQ6UWM7 567 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms