RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RCN2Q14257 317 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 NONOQ15233 471 aaKnown RBP eCLIP4.15□□□□□ -1.75
C11orf88-204ENST00000529661 PHKG1Q16816 387 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 UGP2Q16851 508 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 FUT11Q495W5 492 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 SLC39A12Q504Y0 691 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 TECRLQ5HYJ1 363 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 OR4A47Q6IF82 309 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 RAPH1Q70E73 1250 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 RTN4RL2Q86UN3 420 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 SIAH3Q8IW03 269 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 CLYBLQ8N0X4 340 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 EID3Q8N140 333 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 NOA1Q8NC60 698 aaKnown RBP4.15□□□□□ -1.75
C11orf88-204ENST00000529661 OR52N5Q8NH56 324 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 SEPT1Q8WYJ6 367 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 KRT35Q92764 455 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 ZNF501Q96CX3 271 aaPredicted RBP4.15□□□□□ -1.75
C11orf88-204ENST00000529661 CABS1Q96KC9 395 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 DUX3Q96PT4 197 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 LSG1Q9H089 658 aaKnown RBP4.15□□□□□ -1.75
C11orf88-204ENST00000529661 TFB2MQ9H5Q4 396 aaKnown RBP4.15□□□□□ -1.75
C11orf88-204ENST00000529661 SRD5A3Q9H8P0 318 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 MID1IP1Q9NPA3 183 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 FGF21Q9NSA1 209 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 PKD2L2Q9NZM6 624 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 FBXL5Q9UKA1 691 aa4.15□□□□□ -1.75
C11orf88-204ENST00000529661 A0A1W2PRV1 198 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 O00370 1275 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 GH1P01241 217 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 SERPING1P05155 500 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 IGHV4-31P0DP07 118 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 IGHV4-38-2P0DP08 117 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 LIFP15018 202 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 PAX1P15863 534 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 CA6P23280 308 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 DCTP40126 519 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 ADARP55265 1226 aaKnown RBP4.14□□□□□ -1.75
C11orf88-204ENST00000529661 KIAA1024LP59773 190 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 HILS1P60008 231 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 KIF26BQ2KJY2 2108 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 C2orf76Q3KRA6 126 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.14□□□□□ -1.75
C11orf88-204ENST00000529661 LYSMD4Q5XG99 296 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 TMEM270Q6UE05 265 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 CEACAM20Q6UY09 585 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 CNBD1Q8NA66 436 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 SPC24Q8NBT2 197 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 OR10Q1Q8NGQ4 319 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 AK8Q96MA6 479 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 KLHL5Q96PQ7 755 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 MAP3K3Q99759 626 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 CCDC3Q9BQI4 270 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 URM1Q9BTM9 101 aaKnown RBP4.14□□□□□ -1.75
C11orf88-204ENST00000529661 ZNF696Q9H7X3 374 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 DBNDD1Q9H9R9 158 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 ECHDC1Q9NTX5 307 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 STUB1Q9UNE7 303 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 KLK4Q9Y5K2 254 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 IL16Q14005 1332 aa4.14□□□□□ -1.75
C11orf88-204ENST00000529661 ILVBLA1L0T0 632 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 PMS2P5A8MQ11 134 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 TMEM150CB9EJG8 249 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 KBTBD13C9JR72 458 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 SLC22A2O15244 555 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 ATP6V0E1O15342 81 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 MOCS2O96007 188 aaPredicted RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CGAP01215 116 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 TSHBP01222 138 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 APOHP02749 345 aaPredicted RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 NR3C1P04150 777 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 VCLP18206 1134 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CDH3P22223 829 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CSTF2P33240 577 aaKnown RBP eCLIP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 IER3P46695 156 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CLK1P49759 484 aaKnown RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 ATP12AP54707 1039 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 HERV-K104P61576 105 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 FOLH1Q04609 750 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 HERC3Q15034 1050 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 RBBP7Q16576 425 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 IQCCQ4KMZ1 466 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 PDLIM3Q53GG5 364 aaPredicted RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 SLC35D3Q5M8T2 416 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 SLC35E4Q6ICL7 350 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 PODNL1Q6PEZ8 512 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 PRSS55Q6UWB4 352 aaPredicted RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 KCTD9Q7L273 389 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 ANKRD46Q86W74 232 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 MEX3DQ86XN8 651 aaKnown RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CDK20Q8IZL9 346 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 DNAJC22Q8N4W6 341 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 KLHDC9Q8NEP7 349 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 OR10V1Q8NGI7 309 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 SLC26A7Q8TE54 656 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 UBLCP1Q8WVY7 318 aaPredicted RBP4.13□□□□□ -1.75
C11orf88-204ENST00000529661 SNX21Q969T3 373 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 CDHR1Q96JP9 859 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 NDNQ99608 321 aa4.13□□□□□ -1.75
C11orf88-204ENST00000529661 PSD2Q9BQI7 771 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms