RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 CCND1P24385 295 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 OTX2P32243 289 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 CARSP49589 748 aaKnown RBP10.61□□□□□ -0.71
NR1H3-230ENST00000527949 TERF1P54274 439 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 GNG11P61952 73 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 TIAL1Q01085 375 aaKnown RBP eCLIP10.61□□□□□ -0.71
NR1H3-230ENST00000527949 DR1Q01658 176 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 CHAF1BQ13112 559 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 AIMP2Q13155 320 aaKnown RBP10.61□□□□□ -0.71
NR1H3-230ENST00000527949 FAM53BQ14153 422 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 MSS51Q4VC12 460 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 C1QL3Q5VWW1 255 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 FRMPD2BQ6IN97 320 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 ARHGEF39Q8N4T4 335 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 FDCSPQ8NFU4 85 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 ANKRD7Q92527 254 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 TM9SF4Q92544 642 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 CERS2Q96G23 380 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 PDLIM5Q96HC4 596 aaKnown RBP10.61□□□□□ -0.71
NR1H3-230ENST00000527949 CCDC138Q96M89 665 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 OR2A5Q96R48 311 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 NUDT9Q9BW91 350 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 ZNF304Q9HCX3 659 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 ATP13A2Q9NQ11 1180 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 IARS2Q9NSE4 1012 aaKnown RBP10.61□□□□□ -0.71
NR1H3-230ENST00000527949 TMEM184CQ9NVA4 438 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 TEX264Q9Y6I9 313 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 ESPL1Q14674 2120 aa10.61□□□□□ -0.71
NR1H3-230ENST00000527949 POLEQ07864 2286 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 LOC105369274A0A096LPK9 316 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 LOC102723532A0A0G2JNH3 316 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 A0A0J9YVX5 310 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 ANKUB1A6NFN9 424 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 USP27XA6NNY8 438 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 E7ESA3 106 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 H0YGG7 62 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 SEC31AO94979 1220 aaKnown RBP10.6□□□□□ -0.71
NR1H3-230ENST00000527949 AHSGP02765 367 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 ERVK-10P10266 1014 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 MCM3P25205 808 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 COL8A1P27658 744 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 GABRB3P28472 473 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 IMPA1P29218 277 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 PAFAH1B1P43034 410 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 AP1S2P56377 157 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 ARL4CP56559 192 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 ARF3P61204 181 aaPredicted RBP10.6□□□□□ -0.71
NR1H3-230ENST00000527949 MPP1Q00013 466 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 DSG2Q14126 1118 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 SLC9A5Q14940 896 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 NR6A1Q15406 480 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 HIF1AQ16665 826 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 BBS9Q3SYG4 887 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 TEDDM1Q5T9Z0 273 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 FAM69BQ5VUD6 431 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 UBE2R2Q712K3 238 aaPredicted RBP10.6□□□□□ -0.71
NR1H3-230ENST00000527949 CPNE9Q8IYJ1 553 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 OR4N4Q8N0Y3 316 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 GALNT16Q8N428 558 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 Q8NA96 180 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 BBOF1Q8ND07 529 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 FAM136AQ96C01 138 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 SNF8Q96H20 258 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 C10orf90Q96M02 699 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 SARGQ9BW04 601 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 TGIF2Q9GZN2 237 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 PARVBQ9HBI1 364 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 PLAC1Q9HBJ0 212 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 AGPAT4Q9NRZ5 378 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 C14orf105Q9NVL8 296 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 ZNF282Q9UDV7 671 aaPredicted RBP10.6□□□□□ -0.71
NR1H3-230ENST00000527949 TAC3Q9UHF0 121 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 ENTPD4Q9Y227 616 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 B3GNT3Q9Y2A9 372 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 HS3ST3B1Q9Y662 390 aa10.6□□□□□ -0.71
NR1H3-230ENST00000527949 HIVEP3Q5T1R4 2406 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 ITPR2Q14571 2701 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 DOPEY1Q5JWR5 2465 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 KRT87PA6NCN2 255 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 SOCS6O14544 535 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 TP73O15350 636 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 TSPAN12O95859 305 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 ENO2P09104 434 aaPredicted RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 OCA2Q04671 838 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 CUL1Q13616 776 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 KCTD19Q17RG1 926 aaPredicted RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 FAM45BPQ6NSW5 357 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 SUSD1Q6UWL2 747 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 IGFL2Q6UWQ7 119 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 PIWIL4Q7Z3Z4 852 aaKnown RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 IGDCC3Q8IVU1 814 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 PALM2Q8IXS6 379 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 MYO1HQ8N1T3 1032 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 CSNK1A1LQ8N752 337 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 RBMXL3Q8N7X1 1067 aaKnown RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 FAM45AQ8TCE6 357 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 STT3BQ8TCJ2 826 aa10.59□□□□□ -0.71
NR1H3-230ENST00000527949 RERGQ96A58 199 aaPredicted RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 SNRNP40Q96DI7 357 aaKnown RBP10.59□□□□□ -0.71
NR1H3-230ENST00000527949 ACAT2Q9BWD1 397 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms