RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 FAM8A1Q9UBU6 413 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 DPP7Q9UHL4 492 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 RPS6KA6Q9UK32 745 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 UTS2RQ9UKP6 389 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 KCNE2Q9Y6J6 123 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 AP1M2Q9Y6Q5 423 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 H3BM21 787 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 SCAMP2O15127 329 aaKnown RBP14.84□□□□□ -0.03
USH1C-207ENST00000527720 ENGP17813 658 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 PPIBP23284 216 aaKnown RBP14.84□□□□□ -0.03
USH1C-207ENST00000527720 BDKRB1P46663 353 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 NUP107P57740 925 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 ELP6Q0PNE2 266 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 IL18R1Q13478 541 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 VMACQ2NL98 169 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 KCTD8Q6ZWB6 473 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 ZNF551Q7Z340 670 aaPredicted RBP14.84□□□□□ -0.03
USH1C-207ENST00000527720 RNF175Q8N4F7 328 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 TMIEQ8NEW7 156 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 MBOAT4Q96T53 435 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 GABARAPL1Q9H0R8 117 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 CXorf21Q9HAI6 301 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 SMURF2Q9HAU4 748 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 BTNL2Q9UIR0 455 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 CORO2BQ9UQ03 480 aa14.84□□□□□ -0.03
USH1C-207ENST00000527720 KPNA3O00505 521 aaPredicted RBP14.83□□□□□ -0.03
USH1C-207ENST00000527720 E2F6O75461 281 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 B3GALT4O96024 378 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 JUNBP17275 347 aaPredicted RBP14.83□□□□□ -0.03
USH1C-207ENST00000527720 ITGB7P26010 798 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 DCKP27707 260 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 SHMT2P34897 504 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 IST1P53990 364 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 RAD23AP54725 363 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 PMS2P3Q13401 168 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 VEZF1Q14119 521 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 CCSMST1Q4G0I0 132 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 BROXQ5VW32 411 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 SHQ1Q6PI26 577 aaKnown RBP14.83□□□□□ -0.03
USH1C-207ENST00000527720 ZDHHC21Q8IVQ6 265 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 CPA6Q8N4T0 437 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 VPS37AQ8NEZ2 397 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 OR7G3Q8NG95 312 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 CHTF18Q8WVB6 975 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 CXorf40BQ96DE9 158 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 WDR34Q96EX3 536 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 DUSP26Q9BV47 211 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 POLR1BQ9H9Y6 1135 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 IL1RAPQ9NPH3 570 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 CXXC1Q9P0U4 656 aaPredicted RBP14.83□□□□□ -0.03
USH1C-207ENST00000527720 MRPS23Q9Y3D9 190 aaKnown RBP14.83□□□□□ -0.03
USH1C-207ENST00000527720 PCDHB11Q9Y5F2 797 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 ORC6Q9Y5N6 252 aa14.83□□□□□ -0.03
USH1C-207ENST00000527720 TLL1O43897 1013 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 KCNK5O95279 499 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 C1orf105O95561 183 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 RPS6KA3P51812 740 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 GABARAPL2P60520 117 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 SLC14A1Q13336 389 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 TOP3AQ13472 1001 aaPredicted RBP14.83□□□□□ -0.04
USH1C-207ENST00000527720 LAPTM5Q13571 262 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 DDX39BQ13838 428 aaKnown RBP14.83□□□□□ -0.04
USH1C-207ENST00000527720 RAB39AQ14964 217 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 ANXA8L1Q5VT79 327 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 CAPN13Q6MZZ7 669 aaPredicted RBP14.83□□□□□ -0.04
USH1C-207ENST00000527720 ZCCHC8Q6NZY4 707 aaKnown RBP14.83□□□□□ -0.04
USH1C-207ENST00000527720 ZZZ3Q8IYH5 903 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 LILRA3Q8N6C8 439 aaPredicted RBP14.83□□□□□ -0.04
USH1C-207ENST00000527720 ARL10Q8N8L6 244 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 ARMC5Q96C12 935 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 ZNF514Q96K75 400 aaPredicted RBP14.83□□□□□ -0.04
USH1C-207ENST00000527720 SIRT5Q9NXA8 310 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 TMEM9Q9P0T7 183 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 BLOC1S6Q9UL45 172 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 CDH7Q9ULB5 785 aa14.83□□□□□ -0.04
USH1C-207ENST00000527720 SLC16A6O15403 523 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 ELK4P28324 431 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 HPCAL1P37235 193 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 RAE1P78406 368 aaKnown RBP14.82□□□□□ -0.04
USH1C-207ENST00000527720 GRSF1Q12849 480 aaKnown RBP eCLIP14.82□□□□□ -0.04
USH1C-207ENST00000527720 POM121L1PQ3SYA9 428 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 MED27Q6P2C8 311 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 GALNT18Q6P9A2 607 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 DHRS4L2Q6PKH6 230 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 SLCO4C1Q6ZQN7 724 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 ZNF621Q6ZSS3 439 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 ING5Q8WYH8 240 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 C12orf43Q96C57 262 aaKnown RBP14.82□□□□□ -0.04
USH1C-207ENST00000527720 AMBRA1Q9C0C7 1298 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 TM9SF3Q9HD45 589 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 C17orf113A0A1B0GUU1 675 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 SPINT1O43278 529 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 NOBOXO60393 691 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 LILRB5O75023 590 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 ABCB7O75027 752 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 SOD1P00441 154 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 SEMG1P04279 462 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 CRHBPP24387 322 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 PDHA2P29803 388 aa14.82□□□□□ -0.04
USH1C-207ENST00000527720 ARHGDIAP52565 204 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms