RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 TEX19Q8NA77 164 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 CLEC1AQ8NC01 280 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 CABS1Q96KC9 395 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 OLFM1Q99784 485 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 HAUS8Q9BT25 410 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 SGPP1Q9BX95 441 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 RHOJQ9H4E5 214 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 GRHL1Q9NZI5 618 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 ZNF451Q9Y4E5 1061 aa19.68■□□□□ 0.74
VPS28-206ENST00000526734 FAM95CA0A1B0GW59 222 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 NRP2O60462 931 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 CNOT3O75175 753 aaKnown RBP19.67■□□□□ 0.74
VPS28-206ENST00000526734 UMODP07911 640 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 ZNF37AP17032 561 aaPredicted RBP19.67■□□□□ 0.74
VPS28-206ENST00000526734 RPS15AP62244 130 aaKnown RBP19.67■□□□□ 0.74
VPS28-206ENST00000526734 CHAF1BQ13112 559 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 NKG7Q16617 165 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 NDUFA9Q16795 377 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 PHKG1Q16816 387 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 FAM69BQ5VUD6 431 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 CAPN13Q6MZZ7 669 aaPredicted RBP19.67■□□□□ 0.74
VPS28-206ENST00000526734 LCTLQ6UWM7 567 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 C17orf64Q86WR6 236 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 C10orf90Q96M02 699 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 SPSB2Q99619 263 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 SAYSD1Q9NPB0 183 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 SEMA3GQ9NS98 782 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 ABCF3Q9NUQ8 709 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 ARL15Q9NXU5 204 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 TXNDC16Q9P2K2 825 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 PSAT1Q9Y617 370 aa19.67■□□□□ 0.74
VPS28-206ENST00000526734 GCN1Q92616 2671 aaKnown RBP19.66■□□□□ 0.74
VPS28-206ENST00000526734 KCNE1BA0A087WTH5 132 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 VSTM2BA6NLU5 285 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 OCA2Q04671 838 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 DSG2Q14126 1118 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 DCAF10Q5QP82 559 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 PPP1R32Q7Z5V6 425 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 COL26A1Q96A83 441 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 FBXL8Q96CD0 374 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 CUEDC1Q9NWM3 386 aaPredicted RBP19.66■□□□□ 0.74
VPS28-206ENST00000526734 P4HTMQ9NXG6 502 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 GPR83Q9NYM4 423 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 ZNF282Q9UDV7 671 aaPredicted RBP19.66■□□□□ 0.74
VPS28-206ENST00000526734 CDC23Q9UJX2 597 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 RUVBL1Q9Y265 456 aaKnown RBP19.66■□□□□ 0.74
VPS28-206ENST00000526734 FER1L5A0AVI2 2057 aa19.66■□□□□ 0.74
VPS28-206ENST00000526734 H7BY64 318 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 AGPSO00116 658 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 HAT1O14929 419 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 WISP1O95388 367 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 FBLP22087 321 aaKnown RBP19.65■□□□□ 0.74
VPS28-206ENST00000526734 GRK3P35626 688 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 CSRP3P50461 194 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 SLC12A2P55011 1212 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 MRPS25P82663 173 aaKnown RBP19.65■□□□□ 0.74
VPS28-206ENST00000526734 NAE1Q13564 534 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 FAM53BQ14153 422 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 OR56A3Q8NH54 315 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 TSPAN17Q96FV3 270 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 PRAP1Q96NZ9 151 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 C14orf105Q9NVL8 296 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 C5AR2Q9P296 337 aa19.65■□□□□ 0.74
VPS28-206ENST00000526734 IGLV3-12A0A075B6K2 115 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 PCDH17O14917 1159 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 TUBB4AP04350 444 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 ALPPP05187 535 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 OR1D4P47884 311 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 SOX8P57073 446 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 CDKL1Q00532 357 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 POU4F1Q01851 419 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 TLE1Q04724 770 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 WHAMMP3Q1A5X7 153 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 VWA5B1Q5TIE3 1220 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 ADAMTSL2Q86TH1 951 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 SPNS2Q8IVW8 549 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.64■□□□□ 0.73
VPS28-206ENST00000526734 MIEF2Q96C03 454 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 CPNE1Q99829 537 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 MCMBPQ9BTE3 642 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 DRC3Q9H069 523 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 ATG10Q9H0Y0 220 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 EPN3Q9H201 632 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 CTSFQ9UBX1 484 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 BOD1L1Q8NFC6 3051 aa19.64■□□□□ 0.73
VPS28-206ENST00000526734 K7EM74 188 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 DPM1O60762 260 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 IPO13O94829 963 aaKnown RBP19.63■□□□□ 0.73
VPS28-206ENST00000526734 ANXA5P08758 320 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 ATXN8OSP0DMR3 200 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 NR1D1P20393 614 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 SSTR1P30872 391 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 PLTPP55058 493 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 TAS2R39P59534 338 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 CSNK1G2P78368 415 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 RBBP7Q16576 425 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 C8orf74Q6P047 294 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 SBSNQ6UWP8 590 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 MBOAT1Q6ZNC8 495 aa19.63■□□□□ 0.73
VPS28-206ENST00000526734 CAPN12Q6ZSI9 719 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms