RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ACAP2Q15057 778 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PDK4Q16654 411 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 HIST2H2ACQ16777 129 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PTCHD3Q3KNS1 767 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 FAM153CQ494X1 144 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PAGE2BQ5JRK9 111 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 WASHC2DQ5SRD0 308 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 C1orf189Q5VU69 101 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 GARNL3Q5VVW2 1013 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 HIST2H2AA3Q6FI13 130 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF425Q6IV72 752 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 RHBDD2Q6NTF9 364 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 NIPAL1Q6NVV3 410 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 WDR93Q6P2C0 686 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRMT9Q6P2P2 845 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 EMBQ6PCB8 327 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 INO80CQ6PI98 192 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 TTLL10Q6ZVT0 673 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 LRRC70Q7Z2Q7 622 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 TIPARPQ7Z3E1 657 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 SYVN1Q86TM6 617 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 LCA5Q86VQ0 697 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 THOC6Q86W42 341 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PAQR7Q86WK9 346 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 RAB43Q86YS6 212 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 DSELQ8IZU8 1212 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 KRT78Q8N1N4 520 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CAMKVQ8NCB2 501 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PDPRQ8NCN5 879 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 TTLQ8NG68 377 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 RHEBL1Q8TAI7 183 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CT55Q8WUE5 264 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 DCAKDQ8WVC6 231 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 KCTD4Q8WVF5 259 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 STARD8Q92502 1023 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 COL26A1Q96A83 441 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PYCR2Q96C36 320 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 RNF31Q96EP0 1072 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 MVB12AQ96EY5 273 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 VPS50Q96JG6 964 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC45A3Q96JT2 553 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 UBXN10Q96LJ8 280 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRAP1Q96NZ9 151 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 AIF1LQ9BQI0 150 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 ARHGAP9Q9BRR9 750 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 DHRS4Q9BTZ2 278 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 UNKQ9C0B0 810 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 SPRTNQ9H040 489 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CHST8Q9H2A9 424 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 ACTL8Q9H568 366 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PELI2Q9HAT8 420 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CPNE5Q9HCH3 593 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CUTCQ9NTM9 273 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PCMTD2Q9NV79 361 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 DNAJC11Q9NVH1 559 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CUEDC1Q9NWM3 386 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPRC5BQ9NZH0 403 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 CPSF2Q9P2I0 782 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 OPTCQ9UBM4 332 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 NXT1Q9UKK6 140 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 G3BP2Q9UN86 482 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC22A14Q9Y267 594 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 PCDHGA4Q9Y5G9 962 aa5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 TNPO3Q9Y5L0 923 aaKnown RBP5.17□□□□□ -1.58
HMGB1P40-201ENST00000525121 KCNE1BA0A087WTH5 132 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 A0A088AWK7 358 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 IGKV1-8A0A0C4DH67 115 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 LOC101059948A0A1B0GTJ6 334 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 TRBC2A0A5B9 178 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 FITM1A5D6W6 292 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 URADA6NGE7 173 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 EIF4E1BA6NMX2 242 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 H0YGG7 62 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 K7EPI3 171 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 UBXN8O00124 270 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 PEX12O00623 359 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 NDUFS4O43181 175 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR1F1O43749 312 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDH16O75309 829 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ERLIN1O75477 346 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CREG1O75629 220 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 WISP3O95389 354 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 IGHEP01854 428 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ALDOAP04075 364 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ITGB2P05107 769 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 SERPIND1P05546 499 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 MYBL2P10244 700 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 NPPBP16860 134 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 TAC1P20366 129 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF10P21506 573 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 FBLP22087 321 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 GSTM2P28161 218 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 PTPN4P29074 926 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 RORAP35398 523 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 GGT5P36269 586 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 AVPR1BP47901 424 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 GABRA4P48169 554 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 HSPA7P48741 367 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ALDH18A1P54886 795 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ARF3P61204 181 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms