RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	SNRNP40	Q96DI7	357 aa	Known RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	BSCL2	Q96G97	398 aa	Predicted RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	ADAD1	Q96M93	576 aa	Known RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	MUS81	Q96NY9	551 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	MEIS3	Q99687	375 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	OLFM1	Q99784	485 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	TMEM204	Q9BSN7	226 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	COA1	Q9GZY4	146 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CARD9	Q9H257	536 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	KCNK15	Q9H427	330 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	GORASP2	Q9H8Y8	452 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	SFXN1	Q9H9B4	322 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	SLC28A3	Q9HAS3	691 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	PALMD	Q9NP74	551 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	RBM28	Q9NW13	759 aa	Known RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	FAM118A	Q9NWS6	357 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	ASIC5	Q9NY37	505 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	UTP6	Q9NYH9	597 aa	Known RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	VPS18	Q9P253	973 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	MTUS1	Q9ULD2	1270 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	CCPG1	Q9ULG6	757 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	SNX7	Q9UNH6	387 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	DHDH	Q9UQ10	334 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.14	□□□□□ -1.75
PCM1-223	ENST00000524356		U3KQV3	271 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	LRRC37A	A6NMS7	1700 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	PFAS	O15067	1338 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	DOCK3	Q8IZD9	2030 aa		4.14	□□□□□ -1.75
PCM1-223	ENST00000524356	ALPK3	Q96L96	1907 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	MYO9B	Q13459	2157 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	TRIP12	Q14669	1992 aa	Predicted RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	ANKRD36C	Q5JPF3	1778 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	TRBV2	A0A0J9YWF9	115 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	LRRIQ4	A6NIV6	560 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	FOXO6	A8MYZ6	492 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356		L7N2F9	121 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	TLR4	O00206	839 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	PDHX	O00330	501 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	PRY	O14603	147 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	ATP2A1	O14983	1001 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	T	O15178	435 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	GPC4	O75487	556 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	DAB1	O75553	588 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	MT-CYB	P00156	380 aa	Predicted RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	IGKV5-2	P06315	115 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	ASGR1	P07306	291 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	FCGR2A	P12318	317 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	SKIL	P12757	684 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	FUT1	P19526	365 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	HNRNPA2B1	P22626	353 aa	Known RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	NR2F2	P24468	414 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	ACP1	P24666	158 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	DNAJB1	P25685	340 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	DUSP1	P28562	367 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	CCND3	P30281	292 aa	Predicted RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	STIP1	P31948	543 aa	Known RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	IDUA	P35475	653 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	SERPINH1	P50454	418 aa	Known RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	OAZ1	P54368	228 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	RHAG	Q02094	409 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	CFHR1	Q03591	330 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	GABPB1	Q06547	395 aa	Predicted RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	SHH	Q15465	462 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	CDO1	Q16878	200 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	LRRC26	Q2I0M4	334 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	MCMDC2	Q4G0Z9	681 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	RNASE12	Q5GAN4	147 aa	Known RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	TXNRD3NB	Q6F5E7	133 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	PM20D1	Q6GTS8	502 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	RAET1G	Q6H3X3	334 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	FAM109B	Q6ICB4	259 aa	Predicted RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	WDR88	Q6ZMY6	472 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	PRSS42	Q7Z5A4	293 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	ADAMTSL2	Q86TH1	951 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	VASH2	Q86V25	355 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	DDIAS	Q8IXT1	998 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	CLEC1A	Q8NC01	280 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	ADPRHL1	Q8NDY3	354 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	TAS1R2	Q8TE23	839 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	TRPC4AP	Q8TEL6	797 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	GANC	Q8TET4	914 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	TMEM170A	Q8WVE7	144 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	NSMAF	Q92636	917 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	IGSF8	Q969P0	613 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	SLC25A28	Q96A46	364 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	RRNAD1	Q96FB5	475 aa	Known RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	EGLN2	Q96KS0	407 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	NECTIN4	Q96NY8	510 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	KLHL5	Q96PQ7	755 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	PANX3	Q96QZ0	392 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	TMEM47	Q9BQJ4	181 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	CINP	Q9BW66	212 aa	Predicted RBP	4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	RAB33B	Q9H082	229 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	CLSTN2	Q9H4D0	955 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	SRD5A3	Q9H8P0	318 aa		4.13	□□□□□ -1.75
PCM1-223	ENST00000524356	EPB41L5	Q9HCM4	733 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms