RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 RTP3Q9BQQ7 232 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 FICDQ9BVA6 458 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 MIXL1Q9H2W2 232 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 PAK6Q9NQU5 681 aaPredicted RBP9.89□□□□□ -0.83
SPIDR-224ENST00000524126 DCAF13Q9NV06 445 aaKnown RBP9.89□□□□□ -0.83
SPIDR-224ENST00000524126 MALT1Q9UDY8 824 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 ERVW-1Q9UQF0 538 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 NOSIPQ9Y314 301 aaKnown RBP9.89□□□□□ -0.83
SPIDR-224ENST00000524126 CMAHPQ9Y471 501 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 ZNF451Q9Y4E5 1061 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 PCDHGA9Q9Y5G4 932 aaKnown RBP9.89□□□□□ -0.83
SPIDR-224ENST00000524126 LOC285556D6RIA3 1793 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 LOC102723532A0A0G2JNH3 316 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 DCLK1O15075 740 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 MUSKO15146 869 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 B4GALT5O43286 388 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 PDE9AO76083 593 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 CELF2O95319 508 aaKnown RBP9.89□□□□□ -0.83
SPIDR-224ENST00000524126 ARIH2O95376 493 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 ZNF682O95780 498 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 F9P00740 461 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 RRASP10301 218 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 G6PDP11413 515 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 MAN2A2P49641 1150 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 NPRL3Q12980 569 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 ELOAQ14241 798 aaKnown RBP9.89□□□□□ -0.83
SPIDR-224ENST00000524126 PAFAH1B3Q15102 231 aaKnown RBP9.89□□□□□ -0.83
SPIDR-224ENST00000524126 GRK1Q15835 563 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 LY6KQ17RY6 165 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 ATCAYQ86WG3 371 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 C7orf31Q8N865 590 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 WDR48Q8TAF3 677 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 KLHL6Q8WZ60 621 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 COPS5Q92905 334 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 ESAMQ96AP7 390 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 TMEM209Q96SK2 561 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 NIFKQ9BYG3 293 aaKnown RBP9.89□□□□□ -0.83
SPIDR-224ENST00000524126 ACTL8Q9H568 366 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 IKZF3Q9UKT9 509 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 DOCK3Q8IZD9 2030 aa9.89□□□□□ -0.83
SPIDR-224ENST00000524126 MPC2O95563 127 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 TSPAN19P0C672 248 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 CLCN4P51793 760 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 ST3GAL4Q11206 333 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 KYAT1Q16773 422 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 LDLRAD1Q5T700 205 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 CST9Q5W186 159 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 MSRB3Q8IXL7 192 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 PPHLN1Q8NEY8 458 aaKnown RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SLC22A8Q8TCC7 542 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 UFD1Q92890 307 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 PTP4A1Q93096 173 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 MYDGFQ969H8 173 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 ZBED6CLQ96FA7 236 aaPredicted RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 DIRAS2Q96HU8 199 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 TBL1YQ9BQ87 522 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 KATNAL1Q9BW62 490 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 ZNF225Q9UK10 706 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 TNPO3Q9Y5L0 923 aaKnown RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SNX10Q9Y5X0 201 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SIP14410 1827 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 FABP12A6NFH5 140 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 NCF1BA6NI72 391 aaPredicted RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 CLCA1A8K7I4 914 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 NCF1CA8MVU1 366 aaPredicted RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 HNRNPCL2B2RXH8 293 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 GTPBP1O00178 669 aaKnown RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 GFRA2O00451 464 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 TREHO43280 583 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 TPOP07202 933 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 ACSM4P0C7M7 580 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 TGFB3P10600 412 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 MTHFD2P13995 350 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 NCF1P14598 390 aaPredicted RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SOX3P41225 446 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 ERVK-8P63133 956 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 C2orf80Q0P641 193 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 GRIK2Q13002 908 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 FCN2Q15485 313 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 RUNDC3AQ59EK9 446 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 XKR3Q5GH77 459 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 C6orf136Q5SQH8 315 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SNX20Q7Z614 316 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 DEFB106AQ8N104 65 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SLC35F5Q8WV83 523 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 ASB12Q8WXK4 309 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 FAM149B1Q96BN6 582 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SGTBQ96EQ0 304 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 PPP1R2P1Q96PQ5 205 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 PTPN18Q99952 460 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 CCM2Q9BSQ5 444 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 GABARAPL1Q9H0R8 117 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 PDGFCQ9NRA1 345 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SLC6A13Q9NSD5 602 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 OLA1Q9NTK5 396 aaKnown RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 PRMT7Q9NVM4 692 aaPredicted RBP9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SLC25A37Q9NYZ2 338 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 ZIM2Q9NZV7 527 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SPASTQ9UBP0 616 aa9.88□□□□□ -0.83
SPIDR-224ENST00000524126 SLC6A14Q9UN76 642 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms