RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 RFLNBQ8N5W9 214 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 POC1AQ8NBT0 407 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 MGARPQ8TDB4 240 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 BSCL2Q96G97 398 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 KLHL5Q96PQ7 755 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 PIGQQ9BRB3 760 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 OR2B2Q9GZK3 357 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 LSG1Q9H089 658 aaKnown RBP4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 P2RY12Q9H244 342 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 PRMT8Q9NR22 394 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 NOCTQ9UK39 431 aaKnown RBP4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 FBXL5Q9UKA1 691 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 SLC7A7Q9UM01 511 aa4.24□□□□□ -1.73
HMGB1P1-201ENST00000522557 IGLV9-49A0A0B4J1Y8 123 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 TRBV5-5A0A0J9YX44 114 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 SMIM30A4D0T7 59 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 C2orf81A6NN90 581 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 CTDSPLO15194 276 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 ATP6V0E1O15342 81 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 VEGFDO43915 354 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 KRT36O76013 467 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 IGLV2-11P01706 119 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 C8orf89P0DMQ9 161 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 KRT3P12035 628 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 BPIFB3P59826 476 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 HERC3Q15034 1050 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 P2RY6Q15077 328 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 ZRSR1Q15695 479 aaKnown RBP4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 PHKG1Q16816 387 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 KRTAP24-1Q3LI83 254 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 GPR33Q49SQ1 333 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 TECRLQ5HYJ1 363 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 GFI1BQ5VTD9 330 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 CASC4Q6P4E1 433 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 CPEB2Q7Z5Q1 589 aaKnown RBP4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 AQP12AQ8IXF9 295 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 NDUFAF2Q8N183 169 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 ZNF619Q8N2I2 560 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 RTL3Q8N8U3 475 aaKnown RBP4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 SLC24A4Q8NFF2 622 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 FCAMRQ8WWV6 532 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 NR4A3Q92570 626 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 PYCR2Q96C36 320 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 STAMBPL1Q96FJ0 436 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 CCDC3Q9BQI4 270 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 ACAT2Q9BWD1 397 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 OSBPL8Q9BZF1 889 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 SLC5A7Q9GZV3 580 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 ZMYND12Q9H0C1 365 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 UBQLN3Q9H347 655 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 RAVER2Q9HCJ3 691 aaKnown RBP4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 GPR173Q9NS66 373 aa4.23□□□□□ -1.73
HMGB1P1-201ENST00000522557 C5orf51A6NDU8 294 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 PRKRAO75569 313 aaKnown RBP4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 RPS6KA5O75582 802 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 KRT33AO76009 404 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 NADKO95544 446 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 MOCS2O96007 188 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 THEGLP0DJG4 465 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 CA6P23280 308 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 ARL16Q0P5N6 197 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 NPRL3Q12980 569 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 ZC2HC1CQ53FD0 456 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 ASPRV1Q53RT3 343 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 PRAMEF8Q5VWM4 474 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 PRSS42Q7Z5A4 293 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 ZSCAN30Q86W11 494 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 ALG14Q96F25 216 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 SENP5Q96HI0 755 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 ST6GAL2Q96JF0 529 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 NODALQ96S42 347 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 CDK19Q9BWU1 502 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 CPVLQ9H3G5 476 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 TFB2MQ9H5Q4 396 aaKnown RBP4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 RNPEPL1Q9HAU8 725 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 SDF2L1Q9HCN8 221 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 SPG21Q9NZD8 308 aa4.22□□□□□ -1.73
HMGB1P1-201ENST00000522557 PFASO15067 1338 aa4.21□□□□□ -1.73
HMGB1P1-201ENST00000522557 IGHV4-61A0A0C4DH41 118 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 MTMR11A4FU01 709 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 BMPR1BO00238 502 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 PGRMC2O15173 223 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 ZBTB14O43829 449 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 KERAO60938 352 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 IGHV4-59P01825 116 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 UMODP07911 640 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 DLATP10515 647 aaKnown RBP4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 HLA-DPA1P20036 260 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 ELAVL4P26378 380 aaKnown RBP4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 MAGEB1P43366 347 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 SULT2A1Q06520 285 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 PARP10Q53GL7 1025 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 PDSS1Q5T2R2 415 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 FAM46CQ5VWP2 391 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 MEX3BQ6ZN04 569 aaKnown RBP4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 C1orf186Q6ZWK4 172 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 RABEPKQ7Z6M1 372 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 RTN4RL2Q86UN3 420 aa4.21□□□□□ -1.74
HMGB1P1-201ENST00000522557 AMIGO1Q86WK6 493 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms