RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PTPAQ15257 358 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 PTGISQ16647 500 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 PDLIM3Q53GG5 364 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 LIN9Q5TKA1 542 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 SUSD4Q5VX71 490 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ZDHHC20Q5W0Z9 365 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ZNF704Q6ZNC4 412 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 TMPRSS11FQ6ZWK6 438 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 TFAP2DQ7Z6R9 452 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 TMPRSS11BQ86T26 416 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ATG4DQ86TL0 474 aaPredicted RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 LONP2Q86WA8 852 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 TMC8Q8IU68 726 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ZDHHC17Q8IUH5 632 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 MYOCDQ8IZQ8 938 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 UBE2J2Q8N2K1 259 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 SPATA6LQ8N4H0 392 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 NECAB1Q8N987 351 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 SIDT2Q8NBJ9 832 aaKnown RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 CPEB3Q8NE35 698 aaKnown RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 BBS1Q8NFJ9 593 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ABHD11Q8NFV4 315 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 RDM1Q8NG50 284 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 OR9K2Q8NGE7 335 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 SLC2A14Q8TDB8 520 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 SAP25Q8TEE9 199 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 LIPHQ8WWY8 451 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 HAS2Q92819 552 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 GGHQ92820 318 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 P2RX5Q93086 422 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 KIRREL1Q96J84 757 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 RAB40CQ96S21 281 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 SLC22A12Q96S37 553 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 CITED1Q99966 193 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 C11orf70Q9BRQ4 267 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 NTMT1Q9BV86 223 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 NUP58Q9BVL2 599 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 SLC2A11Q9BYW1 496 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ESRP2Q9H6T0 727 aaKnown RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 PPP1R3EQ9H7J1 279 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 COG4Q9H9E3 785 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 APMAPQ9HDC9 416 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 ANKRD10Q9NXR5 420 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 SPATA7Q9P0W8 599 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 NOCTQ9UK39 431 aaKnown RBP3.83□□□□□ -1.8
SKP1-209ENST00000522552 PLCL2Q9UPR0 1127 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 TNNQ9UQP3 1299 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 MAP3K2Q9Y2U5 619 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 GRIP1Q9Y3R0 1128 aa3.83□□□□□ -1.8
SKP1-209ENST00000522552 IL16Q14005 1332 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 BTBD17A6NE02 478 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 OR2AG2A6NM03 316 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 HSBP1L1C9JCN9 74 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 SLC16A5O15375 505 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 ARHGEF9O43307 516 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 AKR7A2O43488 359 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 SAP30O75446 220 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 UFL1O94874 794 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 NXPH3O95157 252 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 LGI1O95970 557 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 IGHV2-70P01814 119 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 FHP07954 510 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 MYL6BP14649 208 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 GCFC2P16383 781 aaKnown RBP3.82□□□□□ -1.8
SKP1-209ENST00000522552 CR2P20023 1033 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 HNF1AP20823 631 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 SOX2P48431 317 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 STARP49675 285 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 METAP2P50579 478 aaKnown RBP eCLIP3.82□□□□□ -1.8
SKP1-209ENST00000522552 CCL11P51671 97 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 RABGGTBP53611 331 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 NUCB2P80303 420 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 SLC20A2Q08357 652 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 GRIK2Q13002 908 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 MSLNQ13421 630 aaPredicted RBP3.82□□□□□ -1.8
SKP1-209ENST00000522552 DCAF6Q58WW2 860 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 KIAA1755Q5JYT7 1200 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 ATF7IP2Q5U623 682 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 CARD17Q5XLA6 110 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 LRRC66Q68CR7 880 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 FCRLBQ6BAA4 426 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 FAM166AQ6J272 317 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 ZNF534Q76KX8 674 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 TRMT11Q7Z4G4 463 aaKnown RBP3.82□□□□□ -1.8
SKP1-209ENST00000522552 KBTBD2Q8IY47 623 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 THEM5Q8N1Q8 247 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 CHPT1Q8WUD6 406 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 C17orf50Q8WW18 174 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 LARP4BQ92615 738 aaKnown RBP3.82□□□□□ -1.8
SKP1-209ENST00000522552 RFKQ969G6 155 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 MCHR2Q969V1 340 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 C12orf66Q96MD2 445 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 ZNF582Q96NG8 517 aaPredicted RBP3.82□□□□□ -1.8
SKP1-209ENST00000522552 LMF1Q96S06 567 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 NPY6RQ99463 290 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 ALG8Q9BVK2 526 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 CCDC94Q9BW85 323 aaPredicted RBP3.82□□□□□ -1.8
SKP1-209ENST00000522552 PLA2G12BQ9BX93 195 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 KCNK13Q9HB14 408 aa3.82□□□□□ -1.8
SKP1-209ENST00000522552 SEBOXQ9HB31 216 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms